IPL1 (YPL209C)


Gene profile

Gene name: IPL1
Reference locus (S288C): YPL209C
Gene biotype: protein_coding

Description: Spindle assembly checkpoint kinase; Aurora kinase of chromosomal passenger complex; mediates release of mono-oriented kinetochores from microtubules in meiosis I, and kinetochore release from SPB clusters at meiotic exit; helps maintain condensed chromosomes during anaphase; required for SPB cohesion and prevention of multipolar spindle formation; promotes telomerase release at G2/M; Iocalizes to nuclear foci that diffuse upon DNA replication stress; required for inhibition of karyopherin Pse1p upon SAC arrest

Top 10 interactors (score): SLI15 (0.999); NDC80 (0.999); BIR1 (0.999); CIN8 (0.998); CDC5 (0.998); BIM1 (0.996); BUB3 (0.995); MAD2 (0.994); MAD3 (0.992); GLC7 (0.992); ASE1 (0.991); BRN1 (0.99); SMC4 (0.99); STU2 (0.989); HHT1 (0.989); NUF2 (0.987); KIP2 (0.987); KAR3 (0.986); HHT2 (0.986); KIP1 (0.986)

Homologues (species, bitscore): AURKC (Homo sapiens, 285.4); Aurka (Mus musculus, 284.6); aurka (Danio rerio, 287.3); aurka (Xenopus tropicalis, 292.0); aurB (Drosophila melanogaster, 261.5); air-2 (Caenorhabditis elegans, 272.7); AUR3 (Arabidopsis thaliana, 283.1)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005310.1:134366-135469:- gene-YPL209C_AKU4011 rna-NM_001184023.1_AKU4011 cds-NP_015115.1_AKU4011 99.6 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000069.1:340132-341235:- gene-YPL209C_BG1 rna-NM_001184023.1_BG1 cds-NP_015115.1_BG1 99.9 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005518.1:159826-160929:- gene-YPL209C_Bruggeman rna-NM_001184023.1_Bruggeman cds-NP_015115.1_Bruggeman 99.9 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005534.1:156434-157537:- gene-YPL209C_CAT1 rna-NM_001184023.1_CAT1 cds-NP_015115.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005374.1:138551-139654:- gene-YPL209C_CBS1585 rna-NM_001184023.1_CBS1585 cds-NP_015115.1_CBS1585 99.6 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005358.1:152970-154073:- gene-YPL209C_CBS436 rna-NM_001184023.1_CBS436 cds-NP_015115.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005342.1:143355-144458:- gene-YPL209C_CBS6412 rna-NM_001184023.1_CBS6412 cds-NP_015115.1_CBS6412 99.6 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005326.1:134729-135832:- gene-YPL209C_CBS6413 rna-NM_001184023.1_CBS6413 cds-NP_015115.1_CBS6413 99.6 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001537.1:156427-157530:- gene-YPL209C_CENPK1137D rna-NM_001184023.1_CENPK1137D cds-NP_015115.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005486.1:133482-134585:- gene-YPL209C_EthanolRed rna-NM_001184023.1_EthanolRed cds-NP_015115.1_EthanolRed 99.4 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005550.1:140688-141791:- gene-YPL209C_FaliES1 rna-NM_001184023.1_FaliES1 cds-NP_015115.1_FaliES1 99.4 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000069.1:16538-17641:+ gene-YPL209C_JAY291 rna-NM_001184023.1_JAY291 cds-NP_015115.1_JAY291 99.9 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005422.1:151538-152641:- gene-YPL209C_MUCL30387 rna-NM_001184023.1_MUCL30387 cds-NP_015115.1_MUCL30387 99.8 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005454.1:149729-150832:- gene-YPL209C_MUCL30388 rna-NM_001184023.1_MUCL30388 cds-NP_015115.1_MUCL30388 99.6 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005294.1:131681-132784:- gene-YPL209C_MUCL39482 rna-NM_001184023.1_MUCL39482 cds-NP_015115.1_MUCL39482 99.6 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005438.1:150560-151663:- gene-YPL209C_MUCL42920 rna-NM_001184023.1_MUCL42920 cds-NP_015115.1_MUCL42920 100.0 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011825.1:156473-157576:- gene-YPL209C_NCIM3186 rna-NM_001184023.1_NCIM3186 cds-NP_015115.1_NCIM3186 99.7 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005278.1:138130-139233:- gene-YPL209C_NCYC1407 rna-NM_001184023.1_NCYC1407 cds-NP_015115.1_NCYC1407 99.6 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994155.1:145833-146936:- gene-YPL209C_PE2H3 rna-NM_001184023.1_PE2H3 cds-NP_015115.1_PE2H3 99.9 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999887.1:145476-146579:- gene-YPL209C_PE2H4 rna-NM_001184023.1_PE2H4 cds-NP_015115.1_PE2H4 99.9 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001148.4:156490-157593:- gene-YPL209C_S288C rna-NM_001184023.1_S288C cds-NP_015115.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000095.1:16589-17692:+ gene-YPL209C_SA1 rna-NM_001184023.1_SA1 cds-NP_015115.1_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005502.1:140469-141572:- gene-YPL209C_ThermosaccDry rna-NM_001184023.1_ThermosaccDry cds-NP_015115.1_ThermosaccDry 99.4 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005470.1:154513-155616:- gene-YPL209C_VR1 rna-NM_001184023.1_VR1 cds-NP_015115.1_VR1 99.7 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000033.1:139989-141092:- gene-YPL209C_ZTW1 rna-NM_001184023.1_ZTW1 cds-NP_015115.1_ZTW1 99.4 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047502.1:141549-142652:- gene-YPL209C_Sparadoxus rna-NM_001184023.1_Sparadoxus cds-NP_015115.1_Sparadoxus 89.9 100.0 Verified 1 1 1 False True False False False

Additional files