Gene name: IOC2
Reference locus (S288C): YLR095C
Gene biotype: protein_coding
Description: ISWI one complex protein 2; Subunit of the Isw1b complex; exhibits nucleosome-stimulated ATPase activity and acts within coding regions to coordinate transcription elongation with termination and processing; contains a PHD finger motif; other complex members are Isw1p and Ioc4p
Top 10 interactors (score): IOC4 (0.999); ISW1 (0.997); IOC3 (0.995); DLS1 (0.975); ITC1 (0.95); DPB4 (0.947); ISW2 (0.906); CHD1 (0.831); RSC2 (0.726); YNL234W (0.694); YJR112W-A (0.691); YTA7 (0.642); SAS3 (0.6); MGA2 (0.586); MET16 (0.568); HHT2 (0.566); HHT1 (0.564); SPH1 (0.563); HTZ1 (0.561); YPL216W (0.54)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:312149-314605:- | gene-YLR095C_AKU4011 | rna-NM_001181982.1_AKU4011 | cds-NP_013196.1_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000212.1:275316-277802:- | gene-YLR095C_BG1 | rna-NM_001181982.1_BG1 | cds-NP_013196.1_BG1 | 97.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:322029-324473:- | gene-YLR095C_Bruggeman | rna-NM_001181982.1_Bruggeman | cds-NP_013196.1_Bruggeman | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:322373-324817:- | gene-YLR095C_CAT1 | rna-NM_001181982.1_CAT1 | cds-NP_013196.1_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:319263-321749:- | gene-YLR095C_CBS1585 | rna-NM_001181982.1_CBS1585 | cds-NP_013196.1_CBS1585 | 97.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:309890-312334:- | gene-YLR095C_CBS436 | rna-NM_001181982.1_CBS436 | cds-NP_013196.1_CBS436 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:317704-320166:- | gene-YLR095C_CBS6412 | rna-NM_001181982.1_CBS6412 | cds-NP_013196.1_CBS6412 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:319535-322015:- | gene-YLR095C_CBS6413 | rna-NM_001181982.1_CBS6413 | cds-NP_013196.1_CBS6413 | 98.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:314682-317120:- | gene-YLR095C_CENPK1137D | rna-NM_001181982.1_CENPK1137D | cds-NP_013196.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:311668-314166:- | gene-YLR095C_EthanolRed | rna-NM_001181982.1_EthanolRed | cds-NP_013196.1_EthanolRed | 97.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:311544-313982:- | gene-YLR095C_FaliES1 | rna-NM_001181982.1_FaliES1 | cds-NP_013196.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000129.1:86491-88935:- | gene-YLR095C_JAY291 | rna-NM_001181982.1_JAY291 | cds-NP_013196.1_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:319408-321852:- | gene-YLR095C_MUCL30387 | rna-NM_001181982.1_MUCL30387 | cds-NP_013196.1_MUCL30387 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:327071-329515:- | gene-YLR095C_MUCL30388 | rna-NM_001181982.1_MUCL30388 | cds-NP_013196.1_MUCL30388 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:319781-322257:- | gene-YLR095C_MUCL39482 | rna-NM_001181982.1_MUCL39482 | cds-NP_013196.1_MUCL39482 | 98.1 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:319708-322152:- | gene-YLR095C_MUCL42920 | rna-NM_001181982.1_MUCL42920 | cds-NP_013196.1_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:329651-332089:- | gene-YLR095C_NCIM3186 | rna-NM_001181982.1_NCIM3186 | cds-NP_013196.1_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:311852-314320:- | gene-YLR095C_NCYC1407 | rna-NM_001181982.1_NCYC1407 | cds-NP_013196.1_NCYC1407 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:317656-320100:- | gene-YLR095C_PE2H3 | rna-NM_001181982.1_PE2H3 | cds-NP_013196.1_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:317397-319841:- | gene-YLR095C_PE2H4 | rna-NM_001181982.1_PE2H4 | cds-NP_013196.1_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:329677-332115:- | gene-YLR095C_S288C | rna-NM_001181982.1_S288C | cds-NP_013196.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000033.1:41982-44444:+ | gene-YLR095C_SA1 | rna-NM_001181982.1_SA1 | cds-NP_013196.1_SA1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:311720-314158:- | gene-YLR095C_ThermosaccDry | rna-NM_001181982.1_ThermosaccDry | cds-NP_013196.1_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:325903-328341:- | gene-YLR095C_VR1 | rna-NM_001181982.1_VR1 | cds-NP_013196.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000023.1:311100-313586:- | gene-YLR095C_ZTW1 | rna-NM_001181982.1_ZTW1 | cds-NP_013196.1_ZTW1 | 97.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:319949-322381:- | gene-YLR095C_Sparadoxus | rna-NM_001181982.1_Sparadoxus | cds-NP_013196.1_Sparadoxus | 86.8 | 99.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |