INP2 (YMR163C)


Gene profile

Gene name: INP2
Reference locus (S288C): YMR163C
Gene biotype: protein_coding

Description: Inheritance of peroxisomes protein 2; Peroxisome-specific receptor important for peroxisome inheritance; co-fractionates with peroxisome membranes and co-localizes with peroxisomes in vivo; physically interacts with the myosin V motor Myo2p; INP2 is not an essential gene

Top 10 interactors (score): MYO2 (0.997); INP1 (0.956); VAC17 (0.894); PEX19 (0.852); SEC2 (0.78); VAC8 (0.78); YPT11 (0.78); YPT32 (0.78); BIM1 (0.78); PEX25 (0.766); MMR1 (0.763); PEX3 (0.76); PEX27 (0.75); YPT31 (0.746); PEX11 (0.744); KAR9 (0.727); DCI1 (0.718); MYO4 (0.712); PEX34 (0.694); PEX30 (0.651)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005307.1:623776-625893:- gene-YMR163C_AKU4011 rna-NM_001182667.1_AKU4011 cds-NP_013886.1_AKU4011 99.6 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000068.1:46656-48773:+ gene-YMR163C_BG1 rna-NM_001182667.1_BG1 cds-NP_013886.1_BG1 99.3 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005515.1:566951-569068:- gene-YMR163C_Bruggeman rna-NM_001182667.1_Bruggeman cds-NP_013886.1_Bruggeman 99.4 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005531.1:569158-571275:- gene-YMR163C_CAT1 rna-NM_001182667.1_CAT1 cds-NP_013886.1_CAT1 99.3 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005371.1:556701-558818:- gene-YMR163C_CBS1585 rna-NM_001182667.1_CBS1585 cds-NP_013886.1_CBS1585 99.9 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005355.1:560569-562686:- gene-YMR163C_CBS436 rna-NM_001182667.1_CBS436 cds-NP_013886.1_CBS436 99.3 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005339.1:669318-671435:- gene-YMR163C_CBS6412 rna-NM_001182667.1_CBS6412 cds-NP_013886.1_CBS6412 99.9 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005323.1:555251-557368:- gene-YMR163C_CBS6413 rna-NM_001182667.1_CBS6413 cds-NP_013886.1_CBS6413 99.9 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001534.1:578774-580891:- gene-YMR163C_CENPK1137D rna-NM_001182667.1_CENPK1137D cds-NP_013886.1_CENPK1137D 99.3 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005483.1:554866-556983:- gene-YMR163C_EthanolRed rna-NM_001182667.1_EthanolRed cds-NP_013886.1_EthanolRed 99.6 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005547.1:561865-563982:- gene-YMR163C_FaliES1 rna-NM_001182667.1_FaliES1 cds-NP_013886.1_FaliES1 99.6 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000292.1:13551-15668:+ gene-YMR163C_JAY291 rna-NM_001182667.1_JAY291 cds-NP_013886.1_JAY291 99.3 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005419.1:561661-563778:- gene-YMR163C_MUCL30387 rna-NM_001182667.1_MUCL30387 cds-NP_013886.1_MUCL30387 99.3 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005451.1:567185-569302:- gene-YMR163C_MUCL30388 rna-NM_001182667.1_MUCL30388 cds-NP_013886.1_MUCL30388 99.3 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005291.1:557387-559504:- gene-YMR163C_MUCL39482 rna-NM_001182667.1_MUCL39482 cds-NP_013886.1_MUCL39482 99.9 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005435.1:564257-566374:- gene-YMR163C_MUCL42920 rna-NM_001182667.1_MUCL42920 cds-NP_013886.1_MUCL42920 99.6 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011822.1:584225-586342:- gene-YMR163C_NCIM3186 rna-NM_001182667.1_NCIM3186 cds-NP_013886.1_NCIM3186 99.3 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005275.1:557089-559206:- gene-YMR163C_NCYC1407 rna-NM_001182667.1_NCYC1407 cds-NP_013886.1_NCYC1407 99.9 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994152.1:567467-569584:- gene-YMR163C_PE2H3 rna-NM_001182667.1_PE2H3 cds-NP_013886.1_PE2H3 99.3 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999884.1:567917-570034:- gene-YMR163C_PE2H4 rna-NM_001182667.1_PE2H4 cds-NP_013886.1_PE2H4 99.3 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001145.3:584271-586388:- gene-YMR163C_S288C rna-NM_001182667.1_S288C cds-NP_013886.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000002.1:220047-222164:+ gene-YMR163C_SA1 rna-NM_001182667.1_SA1 cds-NP_013886.1_SA1 99.4 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005499.1:557513-559630:- gene-YMR163C_ThermosaccDry rna-NM_001182667.1_ThermosaccDry cds-NP_013886.1_ThermosaccDry 99.6 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005467.1:569974-572091:- gene-YMR163C_VR1 rna-NM_001182667.1_VR1 cds-NP_013886.1_VR1 99.3 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000027.1:532406-534523:- gene-YMR163C_ZTW1 rna-NM_001182667.1_ZTW1 cds-NP_013886.1_ZTW1 99.6 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047499.1:570024-572141:- gene-YMR163C_Sparadoxus rna-NM_001182667.1_Sparadoxus cds-NP_013886.1_Sparadoxus 86.1 99.7 Verified 1 1 1 False True False False False

Additional files