Gene name: INO4
Reference locus (S288C): YOL108C
Gene biotype: protein_coding
Description: Protein INO4; Transcription factor involved in phospholipid synthesis; required for derepression of inositol-choline-regulated genes involved in phospholipid synthesis; forms a complex, with Ino2p, that binds the inositol-choline-responsive element through a basic helix-loop-helix domain
Top 10 interactors (score): INO2 (0.999); OPI1 (0.97); INO1 (0.944); CHO1 (0.882); OPI3 (0.874); CBF1 (0.853); TYE7 (0.82); CHO2 (0.818); ACC1 (0.804); HNM1 (0.794); ITR1 (0.76); PIS1 (0.75); SCS2 (0.749); HAC1 (0.732); PAH1 (0.727); CDS1 (0.727); RTG3 (0.726); EKI1 (0.715); HMS1 (0.706); FAS1 (0.697)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:100657-101112:- | gene-YOL108C_AKU4011 | rna-NM_001183362.1_AKU4011 | cds-NP_014533.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000172.1:65710-66165:- | gene-YOL108C_BG1 | rna-NM_001183362.1_BG1 | cds-NP_014533.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:102226-102681:- | gene-YOL108C_Bruggeman | rna-NM_001183362.1_Bruggeman | cds-NP_014533.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:100750-101205:- | gene-YOL108C_CAT1 | rna-NM_001183362.1_CAT1 | cds-NP_014533.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:95113-95568:- | gene-YOL108C_CBS1585 | rna-NM_001183362.1_CBS1585 | cds-NP_014533.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:100386-100841:- | gene-YOL108C_CBS436 | rna-NM_001183362.1_CBS436 | cds-NP_014533.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:94767-95222:- | gene-YOL108C_CBS6412 | rna-NM_001183362.1_CBS6412 | cds-NP_014533.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:101468-101923:- | gene-YOL108C_CBS6413 | rna-NM_001183362.1_CBS6413 | cds-NP_014533.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:111326-111781:- | gene-YOL108C_CENPK1137D | rna-NM_001183362.1_CENPK1137D | cds-NP_014533.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:98272-98727:- | gene-YOL108C_EthanolRed | rna-NM_001183362.1_EthanolRed | cds-NP_014533.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:100490-100945:- | gene-YOL108C_FaliES1 | rna-NM_001183362.1_FaliES1 | cds-NP_014533.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000393.1:630-1085:- | gene-YOL108C_JAY291 | rna-NM_001183362.1_JAY291 | cds-NP_014533.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:106004-106459:- | gene-YOL108C_MUCL30387 | rna-NM_001183362.1_MUCL30387 | cds-NP_014533.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:109009-109464:- | gene-YOL108C_MUCL30388 | rna-NM_001183362.1_MUCL30388 | cds-NP_014533.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:103018-103473:- | gene-YOL108C_MUCL39482 | rna-NM_001183362.1_MUCL39482 | cds-NP_014533.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:118766-119221:- | gene-YOL108C_MUCL42920 | rna-NM_001183362.1_MUCL42920 | cds-NP_014533.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:111320-111775:- | gene-YOL108C_NCIM3186 | rna-NM_001183362.1_NCIM3186 | cds-NP_014533.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:109105-109560:- | gene-YOL108C_NCYC1407 | rna-NM_001183362.1_NCYC1407 | cds-NP_014533.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:92925-93380:- | gene-YOL108C_PE2H3 | rna-NM_001183362.1_PE2H3 | cds-NP_014533.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:103925-104380:- | gene-YOL108C_PE2H4 | rna-NM_001183362.1_PE2H4 | cds-NP_014533.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:111431-111886:- | gene-YOL108C_S288C | rna-NM_001183362.1_S288C | cds-NP_014533.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000001.1:84909-85364:- | gene-YOL108C_SA1 | rna-NM_001183362.1_SA1 | cds-NP_014533.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:99588-100043:- | gene-YOL108C_ThermosaccDry | rna-NM_001183362.1_ThermosaccDry | cds-NP_014533.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:100171-100626:- | gene-YOL108C_VR1 | rna-NM_001183362.1_VR1 | cds-NP_014533.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000031.1:99269-99724:- | gene-YOL108C_ZTW1 | rna-NM_001183362.1_ZTW1 | cds-NP_014533.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:102875-103327:- | gene-YOL108C_Sparadoxus | rna-NM_001183362.1_Sparadoxus | cds-NP_014533.1_Sparadoxus | 86.8 | 99.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |