IMT1 (YNCO0023W)

Gene profile

Gene name: IMT1
Reference locus (S288C): YNCO0023W
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005309.1:700987-701058:+ gene-YNCO0023W_AKU4011 rna-YNCO0023W_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000123.1:103027-103098:+ gene-YNCO0023W_BG1 rna-YNCO0023W_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable MBVY01000056.1:1828-1899:- gene-YNCO0023W_Bruggeman rna-YNCO0023W_Bruggeman Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005533.1:687101-687172:+ gene-YNCO0023W_CAT1 rna-YNCO0023W_CAT1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005373.1:683974-684045:+ gene-YNCO0023W_CBS1585 rna-YNCO0023W_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005357.1:682663-682734:+ gene-YNCO0023W_CBS436 rna-YNCO0023W_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005341.1:681092-681163:+ gene-YNCO0023W_CBS6412 rna-YNCO0023W_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005325.1:689731-689802:+ gene-YNCO0023W_CBS6413 rna-YNCO0023W_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005485.1:677117-677188:+ gene-YNCO0023W_EthanolRed rna-YNCO0023W_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia MBWD01000109.1:189-260:- gene-YNCO0023W_FaliES1 rna-YNCO0023W_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe MBVX01000207.1:1166-1237:- gene-YNCO0023W_MUCL30387 rna-YNCO0023W_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005453.1:697202-697273:+ gene-YNCO0023W_MUCL30388 rna-YNCO0023W_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia MBVN01000030.1:86-157:- gene-YNCO0023W_MUCL39482 rna-YNCO0023W_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe MBVV01000280.1:223-294:- gene-YNCO0023W_MUCL42920 rna-YNCO0023W_MUCL42920 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005277.1:691401-691472:+ gene-YNCO0023W_NCYC1407 rna-YNCO0023W_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994154.1:690799-690870:+ gene-YNCO0023W_PE2H3 rna-YNCO0023W_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999886.1:701176-701247:+ gene-YNCO0023W_PE2H4 rna-YNCO0023W_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001147.6:710201-710272:+ gene-YNCO0023W_S288C rna-YNCO0023W_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000006.1:120207-120278:+ gene-YNCO0023W_SA1 rna-YNCO0023W_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005501.1:681699-681770:+ gene-YNCO0023W_ThermosaccDry rna-YNCO0023W_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005469.1:745240-745311:+ gene-YNCO0023W_VR1 rna-YNCO0023W_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000032.1:414616-414687:+ gene-YNCO0023W_ZTW1 rna-YNCO0023W_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047501.1:687596-687667:+ gene-YNCO0023W_Sparadoxus rna-YNCO0023W_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files