IMP2 (YMR035W)


Gene profile

Gene name: IMP2
Reference locus (S288C): YMR035W
Gene biotype: protein_coding

Description: Catalytic subunit of mitochondrial inner membrane peptidase complex; required for maturation of mitochondrial proteins of the intermembrane space; complex contains two catalytic subunits (Imp1p and Imp2p that differ in substrate specificity), and Som1p

Top 10 interactors (score): YIL154C (0.92); IMP1 (0.888); ATP23 (0.823); SMD3 (0.811); SOM1 (0.72); OMA1 (0.692); PCP1 (0.689); SPC3 (0.686); ICP55 (0.68); DOP1 (0.664); SUI2 (0.641); HNT2 (0.628); ALD4 (0.614); DIM1 (0.613); OCT1 (0.61); TRM11 (0.604); URH1 (0.574); MGE1 (0.548); YTA12 (0.532); AFG3 (0.532)

Homologues (species, bitscore): IMMP2L (Homo sapiens, 115.5); Immp2l (Mus musculus, 114.8); immp2l (Danio rerio, 124.4); immp1l (Xenopus tropicalis, 70.9); CG11110 (Drosophila melanogaster, 117.1); immp-2 (Caenorhabditis elegans, 87.4); AT3G08980 (Arabidopsis thaliana, 106.3)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005307.1:390741-391274:+ gene-YMR035W_AKU4011 rna-NM_001182532.1_AKU4011 cds-NP_013749.1_AKU4011 99.6 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000201.1:151581-152114:- gene-YMR035W_BG1 rna-NM_001182532.1_BG1 cds-NP_013749.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005515.1:330680-331213:+ gene-YMR035W_Bruggeman rna-NM_001182532.1_Bruggeman cds-NP_013749.1_Bruggeman 100.0 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005531.1:333196-333729:+ gene-YMR035W_CAT1 rna-NM_001182532.1_CAT1 cds-NP_013749.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005371.1:323682-324215:+ gene-YMR035W_CBS1585 rna-NM_001182532.1_CBS1585 cds-NP_013749.1_CBS1585 99.6 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005355.1:329231-329764:+ gene-YMR035W_CBS436 rna-NM_001182532.1_CBS436 cds-NP_013749.1_CBS436 99.8 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005339.1:437084-437617:+ gene-YMR035W_CBS6412 rna-NM_001182532.1_CBS6412 cds-NP_013749.1_CBS6412 99.6 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005323.1:322938-323471:+ gene-YMR035W_CBS6413 rna-NM_001182532.1_CBS6413 cds-NP_013749.1_CBS6413 99.6 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001534.1:335871-336404:+ gene-YMR035W_CENPK1137D rna-NM_001182532.1_CENPK1137D cds-NP_013749.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005483.1:323514-324047:+ gene-YMR035W_EthanolRed rna-NM_001182532.1_EthanolRed cds-NP_013749.1_EthanolRed 99.8 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005547.1:326696-327229:+ gene-YMR035W_FaliES1 rna-NM_001182532.1_FaliES1 cds-NP_013749.1_FaliES1 99.8 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000033.1:109713-110246:- gene-YMR035W_JAY291 rna-NM_001182532.1_JAY291 cds-NP_013749.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005419.1:328639-329172:+ gene-YMR035W_MUCL30387 rna-NM_001182532.1_MUCL30387 cds-NP_013749.1_MUCL30387 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005451.1:333064-333597:+ gene-YMR035W_MUCL30388 rna-NM_001182532.1_MUCL30388 cds-NP_013749.1_MUCL30388 99.8 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005291.1:323965-324498:+ gene-YMR035W_MUCL39482 rna-NM_001182532.1_MUCL39482 cds-NP_013749.1_MUCL39482 99.6 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005435.1:329784-330317:+ gene-YMR035W_MUCL42920 rna-NM_001182532.1_MUCL42920 cds-NP_013749.1_MUCL42920 100.0 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011822.1:341096-341629:+ gene-YMR035W_NCIM3186 rna-NM_001182532.1_NCIM3186 cds-NP_013749.1_NCIM3186 99.6 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005275.1:323882-324415:+ gene-YMR035W_NCYC1407 rna-NM_001182532.1_NCYC1407 cds-NP_013749.1_NCYC1407 99.6 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994152.1:329826-330359:+ gene-YMR035W_PE2H3 rna-NM_001182532.1_PE2H3 cds-NP_013749.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999884.1:335921-336454:+ gene-YMR035W_PE2H4 rna-NM_001182532.1_PE2H4 cds-NP_013749.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001145.3:341142-341675:+ gene-YMR035W_S288C rna-NM_001182532.1_S288C cds-NP_013749.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000005.1:196588-197121:- gene-YMR035W_SA1 rna-NM_001182532.1_SA1 cds-NP_013749.1_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005499.1:323765-324298:+ gene-YMR035W_ThermosaccDry rna-NM_001182532.1_ThermosaccDry cds-NP_013749.1_ThermosaccDry 99.8 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005467.1:328466-328999:+ gene-YMR035W_VR1 rna-NM_001182532.1_VR1 cds-NP_013749.1_VR1 99.8 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000027.1:302780-303313:+ gene-YMR035W_ZTW1 rna-NM_001182532.1_ZTW1 cds-NP_013749.1_ZTW1 99.6 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047499.1:336704-337237:+ gene-YMR035W_Sparadoxus rna-NM_001182532.1_Sparadoxus cds-NP_013749.1_Sparadoxus 91.0 100.0 Verified 1 1 1 False True False False False

Additional files