IMP1 (YMR150C)


Gene profile

Gene name: IMP1
Reference locus (S288C): YMR150C
Gene biotype: protein_coding

Description: Catalytic subunit of mitochondrial inner membrane peptidase complex; required for maturation of mitochondrial proteins of the intermembrane space; complex contains two catalytic subunits (Imp1p and Imp2p that differ in substrate specificty) and Som1p

Top 10 interactors (score): PET111 (0.931); YMR035W (0.888); SOM1 (0.838); ATP23 (0.766); PCP1 (0.757); GEM1 (0.712); SPC3 (0.686); PIM1 (0.676); OMA1 (0.662); MAS1 (0.64); MAS2 (0.63); ELP4 (0.613); OCT1 (0.577); TIM8 (0.568); ICP55 (0.542); COR1 (0.521); SPC1 (0.503); JEM1 (0.492); MDJ1 (0.492); YME1 (0.49)

Homologues (species, bitscore): IMMP1L (Homo sapiens, 89.4); Immp1l (Mus musculus, 89.4); immp1l (Danio rerio, 90.5); immp1l (Xenopus tropicalis, 78.2); CG9240 (Drosophila melanogaster, 77.8); AT1G53530 (Arabidopsis thaliana, 87.0)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005307.1:601460-602032:- gene-YMR150C_AKU4011 rna-NM_001182652.1_AKU4011 cds-NP_013870.1_AKU4011 100.0 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000068.1:70521-71093:+ gene-YMR150C_BG1 rna-NM_001182652.1_BG1 cds-NP_013870.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005515.1:544628-545200:- gene-YMR150C_Bruggeman rna-NM_001182652.1_Bruggeman cds-NP_013870.1_Bruggeman 100.0 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005531.1:546837-547409:- gene-YMR150C_CAT1 rna-NM_001182652.1_CAT1 cds-NP_013870.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005371.1:534384-534956:- gene-YMR150C_CBS1585 rna-NM_001182652.1_CBS1585 cds-NP_013870.1_CBS1585 100.0 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005355.1:538257-538829:- gene-YMR150C_CBS436 rna-NM_001182652.1_CBS436 cds-NP_013870.1_CBS436 99.8 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005339.1:647091-647574:- gene-YMR150C_CBS6412 rna-NM_001182652.1_CBS6412 cds-NP_013870.1_CBS6412 67.6 78.8 Unannotated 1 1 0 False False False True False
CBS6413 GCA_001738265.1 Sake Asia CM005323.1:532935-533507:- gene-YMR150C_CBS6413 rna-NM_001182652.1_CBS6413 cds-NP_013870.1_CBS6413 100.0 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001534.1:556466-557038:- gene-YMR150C_CENPK1137D rna-NM_001182652.1_CENPK1137D cds-NP_013870.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005483.1:532550-533122:- gene-YMR150C_EthanolRed rna-NM_001182652.1_EthanolRed cds-NP_013870.1_EthanolRed 100.0 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005547.1:539549-540121:- gene-YMR150C_FaliES1 rna-NM_001182652.1_FaliES1 cds-NP_013870.1_FaliES1 100.0 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000115.1:11385-11957:- gene-YMR150C_JAY291 rna-NM_001182652.1_JAY291 cds-NP_013870.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005419.1:539353-539925:- gene-YMR150C_MUCL30387 rna-NM_001182652.1_MUCL30387 cds-NP_013870.1_MUCL30387 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005451.1:544877-545449:- gene-YMR150C_MUCL30388 rna-NM_001182652.1_MUCL30388 cds-NP_013870.1_MUCL30388 100.0 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005291.1:535071-535643:- gene-YMR150C_MUCL39482 rna-NM_001182652.1_MUCL39482 cds-NP_013870.1_MUCL39482 100.0 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005435.1:541362-541934:- gene-YMR150C_MUCL42920 rna-NM_001182652.1_MUCL42920 cds-NP_013870.1_MUCL42920 100.0 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011822.1:561910-562482:- gene-YMR150C_NCIM3186 rna-NM_001182652.1_NCIM3186 cds-NP_013870.1_NCIM3186 99.8 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005275.1:534774-535346:- gene-YMR150C_NCYC1407 rna-NM_001182652.1_NCYC1407 cds-NP_013870.1_NCYC1407 100.0 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994152.1:545139-545711:- gene-YMR150C_PE2H3 rna-NM_001182652.1_PE2H3 cds-NP_013870.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999884.1:545597-546169:- gene-YMR150C_PE2H4 rna-NM_001182652.1_PE2H4 cds-NP_013870.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001145.3:561956-562528:- gene-YMR150C_S288C rna-NM_001182652.1_S288C cds-NP_013870.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000048.1:8748-9320:+ gene-YMR150C_SA1 rna-NM_001182652.1_SA1 cds-NP_013870.1_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005499.1:535197-535769:- gene-YMR150C_ThermosaccDry rna-NM_001182652.1_ThermosaccDry cds-NP_013870.1_ThermosaccDry 100.0 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005467.1:547652-548224:- gene-YMR150C_VR1 rna-NM_001182652.1_VR1 cds-NP_013870.1_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000027.1:510091-510663:- gene-YMR150C_ZTW1 rna-NM_001182652.1_ZTW1 cds-NP_013870.1_ZTW1 100.0 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047499.1:546507-547079:- gene-YMR150C_Sparadoxus rna-NM_001182652.1_Sparadoxus cds-NP_013870.1_Sparadoxus 90.9 100.0 Verified 1 1 1 False True False False False

Additional files