Gene name: IMH1
Reference locus (S288C): YLR309C
Gene biotype: protein_coding
Description: Golgin IMH1; Protein involved in vesicular transport; mediates transport between an endosomal compartment and the Golgi, contains a Golgi-localization (GRIP) domain that interacts with activated Arl1p-GTP to localize Imh1p to the Golgi
Top 10 interactors (score): YPT6 (0.961); ARL1 (0.951); SYS1 (0.885); RUD3 (0.859); ARL3 (0.836); VPS53 (0.811); VPS52 (0.793); ENV7 (0.793); YDR250C (0.746); VPS54 (0.72); YGR045C (0.717); SEC7 (0.705); VPS51 (0.698); YGR125W (0.692); SLC1 (0.692); DDI2 (0.678); COY1 (0.629); USO1 (0.619); RGP1 (0.608); VPS62 (0.573)
Homologues (species, bitscore): LAMA2 (Homo sapiens, 71.6); Lama2 (Mus musculus, 62.4); lama5 (Danio rerio, 68.2); lama3 (Xenopus tropicalis, 65.9); epi-1 (Caenorhabditis elegans, 60.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:697484-700219:- | gene-YLR309C_AKU4011 | rna-NM_001182197.2_AKU4011 | cds-NP_013412.1_AKU4011 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000170.1:32408-35143:+ | gene-YLR309C_BG1 | rna-NM_001182197.2_BG1 | cds-NP_013412.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:733311-736046:- | gene-YLR309C_Bruggeman | rna-NM_001182197.2_Bruggeman | cds-NP_013412.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:731483-734218:- | gene-YLR309C_CAT1 | rna-NM_001182197.2_CAT1 | cds-NP_013412.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:732411-735146:- | gene-YLR309C_CBS1585 | rna-NM_001182197.2_CBS1585 | cds-NP_013412.1_CBS1585 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:717024-719759:- | gene-YLR309C_CBS436 | rna-NM_001182197.2_CBS436 | cds-NP_013412.1_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:695050-697785:- | gene-YLR309C_CBS6412 | rna-NM_001182197.2_CBS6412 | cds-NP_013412.1_CBS6412 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:733074-735809:- | gene-YLR309C_CBS6413 | rna-NM_001182197.2_CBS6413 | cds-NP_013412.1_CBS6413 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:733647-736382:- | gene-YLR309C_CENPK1137D | rna-NM_001182197.2_CENPK1137D | cds-NP_013412.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:690764-693499:- | gene-YLR309C_EthanolRed | rna-NM_001182197.2_EthanolRed | cds-NP_013412.1_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:719964-722699:- | gene-YLR309C_FaliES1 | rna-NM_001182197.2_FaliES1 | cds-NP_013412.1_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000296.1:45126-47861:+ | gene-YLR309C_JAY291 | rna-NM_001182197.2_JAY291 | cds-NP_013412.1_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:732545-735280:- | gene-YLR309C_MUCL30387 | rna-NM_001182197.2_MUCL30387 | cds-NP_013412.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:738128-740863:- | gene-YLR309C_MUCL30388 | rna-NM_001182197.2_MUCL30388 | cds-NP_013412.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:733641-736376:- | gene-YLR309C_MUCL39482 | rna-NM_001182197.2_MUCL39482 | cds-NP_013412.1_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:728794-731529:- | gene-YLR309C_MUCL42920 | rna-NM_001182197.2_MUCL42920 | cds-NP_013412.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:749008-751743:- | gene-YLR309C_NCIM3186 | rna-NM_001182197.2_NCIM3186 | cds-NP_013412.1_NCIM3186 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:742983-745718:- | gene-YLR309C_NCYC1407 | rna-NM_001182197.2_NCYC1407 | cds-NP_013412.1_NCYC1407 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:730792-733527:- | gene-YLR309C_PE2H3 | rna-NM_001182197.2_PE2H3 | cds-NP_013412.1_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:730536-733271:- | gene-YLR309C_PE2H4 | rna-NM_001182197.2_PE2H4 | cds-NP_013412.1_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:749034-751769:- | gene-YLR309C_S288C | rna-NM_001182197.2_S288C | cds-NP_013412.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000039.1:32534-35269:+ | gene-YLR309C_SA1 | rna-NM_001182197.2_SA1 | cds-NP_013412.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:721858-724593:- | gene-YLR309C_ThermosaccDry | rna-NM_001182197.2_ThermosaccDry | cds-NP_013412.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:734000-736735:- | gene-YLR309C_VR1 | rna-NM_001182197.2_VR1 | cds-NP_013412.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000025.1:60282-63017:- | gene-YLR309C_ZTW1 | rna-NM_001182197.2_ZTW1 | cds-NP_013412.1_ZTW1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:708028-710769:- | gene-YLR309C_Sparadoxus | rna-NM_001182197.2_Sparadoxus | cds-NP_013412.1_Sparadoxus | 87.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |