IME4 (YGL192W)


Gene profile

Gene name: IME4
Reference locus (S288C): YGL192W
Gene biotype: protein_coding

Description: N6-adenosine-methyltransferase IME4; mRNA N6-adenosine methyltransferase required for entry into meiosis; mediates N6-adenosine methylation of bulk mRNA during the induction of sporulation which includes the meiotic regulators IME1, IME2 and IME4 itself; repressed in haploids via production of antisense IME4 transcripts; transcribed in diploid cells where antisense transcription is repressed; orthologous to human METTL3 (MT-A70); Belongs to the MT-A70-like family

Top 10 interactors (score): KAR4 (0.999); SLZ1 (0.968); MUM2 (0.942); IME1 (0.918); IME2 (0.893); SER3 (0.779); PHO92 (0.752); RME1 (0.751); PHO84 (0.749); NDT80 (0.747); GAL10 (0.744); STO1 (0.733); FLO11 (0.718); ZIP2 (0.716); KCS1 (0.697); MATALPHA2 (0.693); HMLALPHA2 (0.691); RQC2 (0.683); MTQ2 (0.653); YFL012W (0.615)

Homologues (species, bitscore): METTL3 (Homo sapiens, 297.7); Mettl3 (Mus musculus, 296.2); mettl3 (Danio rerio, 292.0); mettl3 (Xenopus tropicalis, 294.7); Ime4 (Drosophila melanogaster, 292.4); MTA (Arabidopsis thaliana, 284.6)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005301.1:144782-146584:+ gene-YGL192W_AKU4011 rna-NM_001181057.3_AKU4011 cds-NP_011323.3_AKU4011 99.7 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000132.1:263854-265656:- gene-YGL192W_BG1 rna-NM_001181057.3_BG1 cds-NP_011323.3_BG1 99.0 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005509.1:147023-148825:+ gene-YGL192W_Bruggeman rna-NM_001181057.3_Bruggeman cds-NP_011323.3_Bruggeman 99.1 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005525.1:142637-144439:+ gene-YGL192W_CAT1 rna-NM_001181057.3_CAT1 cds-NP_011323.3_CAT1 99.0 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005365.1:147921-149723:+ gene-YGL192W_CBS1585 rna-NM_001181057.3_CBS1585 cds-NP_011323.3_CBS1585 99.6 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005349.1:142904-144706:+ gene-YGL192W_CBS436 rna-NM_001181057.3_CBS436 cds-NP_011323.3_CBS436 99.2 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005333.1:134699-136501:+ gene-YGL192W_CBS6412 rna-NM_001181057.3_CBS6412 cds-NP_011323.3_CBS6412 99.6 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005317.1:142233-144035:+ gene-YGL192W_CBS6413 rna-NM_001181057.3_CBS6413 cds-NP_011323.3_CBS6413 99.6 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001528.1:142445-144247:+ gene-YGL192W_CENPK1137D rna-NM_001181057.3_CENPK1137D cds-NP_011323.3_CENPK1137D 99.2 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005477.1:134765-136567:+ gene-YGL192W_EthanolRed rna-NM_001181057.3_EthanolRed cds-NP_011323.3_EthanolRed 99.6 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005541.1:135765-137567:+ gene-YGL192W_FaliES1 rna-NM_001181057.3_FaliES1 cds-NP_011323.3_FaliES1 99.6 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000397.1:61095-62897:+ gene-YGL192W_JAY291 rna-NM_001181057.3_JAY291 cds-NP_011323.3_JAY291 99.1 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005413.1:144260-146062:+ gene-YGL192W_MUCL30387 rna-NM_001181057.3_MUCL30387 cds-NP_011323.3_MUCL30387 99.2 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005445.1:146587-148724:+ gene-YGL192W_MUCL30388 rna-NM_001181057.3_MUCL30388 cds-NP_011323.3_MUCL30388 83.9 100.0 Unannotated 1 1 0 False False False True False
MUCL39482 GCA_001738235.1 Sake Asia CM005285.1:144931-146733:+ gene-YGL192W_MUCL39482 rna-NM_001181057.3_MUCL39482 cds-NP_011323.3_MUCL39482 99.6 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005429.1:147567-149369:+ gene-YGL192W_MUCL42920 rna-NM_001181057.3_MUCL42920 cds-NP_011323.3_MUCL42920 99.2 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011816.1:142246-144048:+ gene-YGL192W_NCIM3186 rna-NM_001181057.3_NCIM3186 cds-NP_011323.3_NCIM3186 99.3 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005269.1:136413-138215:+ gene-YGL192W_NCYC1407 rna-NM_001181057.3_NCYC1407 cds-NP_011323.3_NCYC1407 99.6 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994146.1:138407-140209:+ gene-YGL192W_PE2H3 rna-NM_001181057.3_PE2H3 cds-NP_011323.3_PE2H3 99.1 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999878.1:137955-139757:+ gene-YGL192W_PE2H4 rna-NM_001181057.3_PE2H4 cds-NP_011323.3_PE2H4 99.1 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001139.9:142246-144048:+ gene-YGL192W_S288C rna-NM_001181057.3_S288C cds-NP_011323.3_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000067.1:2008-3810:+ gene-YGL192W_SA1 rna-NM_001181057.3_SA1 cds-NP_011323.3_SA1 99.1 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005493.1:136027-137829:+ gene-YGL192W_ThermosaccDry rna-NM_001181057.3_ThermosaccDry cds-NP_011323.3_ThermosaccDry 99.6 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005461.1:143311-145113:+ gene-YGL192W_VR1 rna-NM_001181057.3_VR1 cds-NP_011323.3_VR1 99.1 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000014.1:134563-136365:+ gene-YGL192W_ZTW1 rna-NM_001181057.3_ZTW1 cds-NP_011323.3_ZTW1 99.7 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047493.1:141434-143242:+ gene-YGL192W_Sparadoxus rna-NM_001181057.3_Sparadoxus cds-NP_011323.3_Sparadoxus 88.8 99.4 Verified 1 1 1 False True False False False

Additional files