IMA5 (YJL216C)


Gene profile

Gene name: IMA5
Reference locus (S288C): YJL216C
Gene biotype: protein_coding

Description: Oligo-1,6-glucosidase IMA5; Alpha-glucosidase; specificity for isomaltose, maltose, and palatinose, but not alpha-methylglucoside; most distant member of the IMA isomaltase family, but with similar catalytic properties as Ima1p and Ima2p; not required for isomaltose utilization, but Ima5p overexpression allows the ima1 null mutant to grow on isomaltose; can cleave alpha-1,3 linkage of nigerose and turanose and alpha-1,5 linkage of leucrose and is very sensitive to temperature in vitro

Top 10 interactors (score): SUC2 (0.955); SGA1 (0.954); MAL11 (0.901); MAL13 (0.821); MAL31 (0.813); MUP1 (0.798); MUP3 (0.776); MAL33 (0.746); CWH41 (0.712); MPH2 (0.71); HXT9 (0.695); SEC4 (0.676); MPH3 (0.67); GPH1 (0.645); SCC2 (0.62); YKR075C (0.619); YLR157W-E (0.613); YJL218W (0.613); YEL075W-A (0.612); REE1 (0.611)

Homologues (species, bitscore): SLC3A1 (Homo sapiens, 179.1); Slc3a1 (Mus musculus, 173.7); slc3a1 (Danio rerio, 209.1); slc3a1 (Xenopus tropicalis, 199.5); Mal-B1 (Drosophila melanogaster, 242.7); atgp-2 (Caenorhabditis elegans, 112.8); ISA1 (Arabidopsis thaliana, 57.4)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
BG1 GCA_001932575.1 Bioethanol South America MSHP01000202.1:841-2586:- gene-YJL216C_BG1 rna-NM_001181649.1_BG1 cds-NP_012319.1_BG1 93.5 100.0 Unannotated 1 1 0 False False False False True
Bruggeman GCA_001738585.1 Bread Not Applicable CM005512.1:24551-26296:- gene-YJL216C_Bruggeman rna-NM_001181649.1_Bruggeman cds-NP_012319.1_Bruggeman 96.2 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005528.1:26576-29051:- gene-YJL216C_CAT1 rna-NM_001181649.1_CAT1 cds-NP_012319.1_CAT1 68.9 100.0 Unannotated 1 1 0 False False False True False
CBS1585 GCA_001738375.1 Sake Asia MBVS01000086.1:4846-6591:+ gene-YJL216C_CBS1585 rna-NM_001181649.1_CBS1585 cds-NP_012319.1_CBS1585 98.7 100.0 Unannotated 1 1 0 False False False False True
CBS436 GCA_001738355.1 Sake Asia CM005352.1:43132-44877:- gene-YJL216C_CBS436 rna-NM_001181649.1_CBS436 cds-NP_012319.1_CBS436 93.6 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia MBVP01000092.1:5070-6815:+ gene-YJL216C_CBS6413 rna-NM_001181649.1_CBS6413 cds-NP_012319.1_CBS6413 99.2 100.0 Unannotated 1 1 0 False False False False True
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001531.1:6808-8553:- gene-YJL216C_CENPK1137D rna-NM_001181649.1_CENPK1137D cds-NP_012319.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005480.1:16782-18527:- gene-YJL216C_EthanolRed rna-NM_001181649.1_EthanolRed cds-NP_012319.1_EthanolRed 99.2 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005544.1:19701-21446:- gene-YJL216C_FaliES1 rna-NM_001181649.1_FaliES1 cds-NP_012319.1_FaliES1 99.3 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000448.1:17554-19300:- gene-YJL216C_JAY291 rna-NM_001181649.1_JAY291 cds-NP_012319.1_JAY291 90.6 100.0 Unannotated 1 1 0 False False False True False
MUCL30387 GCA_001738515.1 Bread Europe CM005416.1:26284-28029:- gene-YJL216C_MUCL30387 rna-NM_001181649.1_MUCL30387 cds-NP_012319.1_MUCL30387 96.1 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005448.1:22440-24185:- gene-YJL216C_MUCL30388 rna-NM_001181649.1_MUCL30388 cds-NP_012319.1_MUCL30388 96.2 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia MBVN01000044.1:4862-6607:+ gene-YJL216C_MUCL39482 rna-NM_001181649.1_MUCL39482 cds-NP_012319.1_MUCL39482 98.7 100.0 Unannotated 1 1 0 False False False False True
MUCL42920 GCA_001738485.1 Bread Europe CM005432.1:21731-23476:- gene-YJL216C_MUCL42920 rna-NM_001181649.1_MUCL42920 cds-NP_012319.1_MUCL42920 96.3 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011819.1:24320-26065:- gene-YJL216C_NCIM3186 rna-NM_001181649.1_NCIM3186 cds-NP_012319.1_NCIM3186 97.0 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia MBVM01000020.1:4807-6552:+ gene-YJL216C_NCYC1407 rna-NM_001181649.1_NCYC1407 cds-NP_012319.1_NCYC1407 98.7 100.0 Unannotated 1 1 0 False False False False True
PE2H3 GCA_905220325.1 Bioethanol South America HG994149.1:28431-30176:- gene-YJL216C_PE2H3 rna-NM_001181649.1_PE2H3 cds-NP_012319.1_PE2H3 93.6 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999877.1:27985-29731:- gene-YJL216C_PE2H4 rna-NM_001181649.1_PE2H4 cds-NP_012319.1_PE2H4 90.6 100.0 Unannotated 1 1 0 False False False True False
S288C GCF_000146045.2 Laboratory Not applicable NC_001142.9:24341-26086:- gene-YJL216C_S288C rna-NM_001181649.1_S288C cds-NP_012319.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000022.1:127789-129534:+ gene-YJL216C_SA1 rna-NM_001181649.1_SA1 cds-NP_012319.1_SA1 93.5 100.0 Unannotated 1 1 0 False False False False True
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005496.1:15154-16899:- gene-YJL216C_ThermosaccDry rna-NM_001181649.1_ThermosaccDry cds-NP_012319.1_ThermosaccDry 99.3 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005460.1:33008-34748:- gene-YJL216C_VR1 rna-NM_001181649.1_VR1 cds-NP_012319.1_VR1 91.6 99.3 Unannotated 1 1 0 False False True False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000021.1:3103-4848:- gene-YJL216C_ZTW1 rna-NM_001181649.1_ZTW1 cds-NP_012319.1_ZTW1 99.3 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047496.1:25514-27259:- gene-YJL216C_Sparadoxus rna-NM_001181649.1_Sparadoxus cds-NP_012319.1_Sparadoxus 84.7 100.0 Verified 1 1 1 False True False False False

Additional files