Gene name: IMA1
Reference locus (S288C): YGR287C
Gene biotype: protein_coding
Description: Oligo-1,6-glucosidase IMA1; Major isomaltase (alpha-1,6-glucosidase/alpha-methylglucosidase); required for isomaltose utilization; preferred specificity for isomaltose, alpha-methylglucoside, and palatinose, but also exhibits alpha-1,2 glucosidase activity on sucrose and kojibiose, and can cleave the 1,3-alpha linkage of nigerose and turanose and the alpha-1,5 linkage of leucrose in vitro; member of the IMA isomaltase family; Belongs to the glycosyl hydrolase 13 family
Top 10 interactors (score): SUC2 (0.956); SGA1 (0.947); MAL11 (0.899); MAL31 (0.819); MUP1 (0.798); MUP3 (0.767); MAL33 (0.76); MAL13 (0.746); CWH41 (0.698); YBR298C-A (0.695); GPH1 (0.676); SEC4 (0.676); BIO2 (0.67); ZNF1 (0.656); SCC2 (0.597); COS2 (0.592); RDL1 (0.578); YBR300C (0.524); FMP42 (0.492); YGR021W (0.46)
Homologues (species, bitscore): SLC3A1 (Homo sapiens, 191.4); Slc3a1 (Mus musculus, 180.6); slc3a1 (Danio rerio, 214.5); slc3a1 (Xenopus tropicalis, 205.7); Mal-B1 (Drosophila melanogaster, 249.6); atgp-2 (Caenorhabditis elegans, 108.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:1032637-1034406:- | gene-YGR287C_AKU4011 | rna-NM_001181416.3_AKU4011 | cds-NP_011803.3_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000003.1:1-1280:+ | gene-YGR287C_BG1 | rna-NM_001181416.3_BG1 | cds-NP_011803.3_BG1 | 72.0 | 72.3 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:1041459-1043227:- | gene-YGR287C_Bruggeman | rna-NM_001181416.3_Bruggeman | cds-NP_011803.3_Bruggeman | 80.3 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:1040923-1042807:- | gene-YGR287C_CAT1 | rna-NM_001181416.3_CAT1 | cds-NP_011803.3_CAT1 | 79.7 | 92.4 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:1035506-1037275:- | gene-YGR287C_CBS1585 | rna-NM_001181416.3_CBS1585 | cds-NP_011803.3_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:1039177-1041444:- | gene-YGR287C_CBS436 | rna-NM_001181416.3_CBS436 | cds-NP_011803.3_CBS436 | 77.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:1026397-1028166:- | gene-YGR287C_CBS6412 | rna-NM_001181416.3_CBS6412 | cds-NP_011803.3_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:1032450-1034219:- | gene-YGR287C_CBS6413 | rna-NM_001181416.3_CBS6413 | cds-NP_011803.3_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:1066946-1068715:- | gene-YGR287C_CENPK1137D | rna-NM_001181416.3_CENPK1137D | cds-NP_011803.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:1020473-1022242:- | gene-YGR287C_EthanolRed | rna-NM_001181416.3_EthanolRed | cds-NP_011803.3_EthanolRed | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:1025279-1027048:- | gene-YGR287C_FaliES1 | rna-NM_001181416.3_FaliES1 | cds-NP_011803.3_FaliES1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000076.1:3264-4982:+ | gene-YGR287C_JAY291 | rna-NM_001181416.3_JAY291 | cds-NP_011803.3_JAY291 | 94.1 | 96.8 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:1038936-1040602:- | gene-YGR287C_MUCL30387 | rna-NM_001181416.3_MUCL30387 | cds-NP_011803.3_MUCL30387 | 91.2 | 93.9 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:1037071-1039198:- | gene-YGR287C_MUCL30388 | rna-NM_001181416.3_MUCL30388 | cds-NP_011803.3_MUCL30388 | 71.2 | 92.4 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:1030612-1032381:- | gene-YGR287C_MUCL39482 | rna-NM_001181416.3_MUCL39482 | cds-NP_011803.3_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:1048542-1050809:- | gene-YGR287C_MUCL42920 | rna-NM_001181416.3_MUCL42920 | cds-NP_011803.3_MUCL42920 | 76.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:1067222-1068991:- | gene-YGR287C_NCIM3186 | rna-NM_001181416.3_NCIM3186 | cds-NP_011803.3_NCIM3186 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:1026241-1028099:- | gene-YGR287C_NCYC1407 | rna-NM_001181416.3_NCYC1407 | cds-NP_011803.3_NCYC1407 | 94.2 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:1051483-1053252:- | gene-YGR287C_PE2H3 | rna-NM_001181416.3_PE2H3 | cds-NP_011803.3_PE2H3 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:1056322-1058091:- | gene-YGR287C_PE2H4 | rna-NM_001181416.3_PE2H4 | cds-NP_011803.3_PE2H4 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:1067222-1068991:- | gene-YGR287C_S288C | rna-NM_001181416.3_S288C | cds-NP_011803.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000063.1:65509-66921:- | gene-YGR287C_SA1 | rna-NM_001181416.3_SA1 | cds-NP_011803.3_SA1 | 77.2 | 79.6 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:1045799-1047568:- | gene-YGR287C_ThermosaccDry | rna-NM_001181416.3_ThermosaccDry | cds-NP_011803.3_ThermosaccDry | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:1151669-1153386:- | gene-YGR287C_VR1 | rna-NM_001181416.3_VR1 | cds-NP_011803.3_VR1 | 93.9 | 96.8 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000016.1:347212-348981:- | gene-YGR287C_ZTW1 | rna-NM_001181416.3_ZTW1 | cds-NP_011803.3_ZTW1 | 98.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:1038059-1039828:- | gene-YGR287C_Sparadoxus | rna-NM_001181416.3_Sparadoxus | cds-NP_011803.3_Sparadoxus | 89.1 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |