ILV2 (YMR108W)


Gene profile

Gene name: ILV2
Reference locus (S288C): YMR108W
Gene biotype: protein_coding

Description: Acetolactate synthase catalytic subunit, mitochondrial; Acetolactate synthase; catalyses the first common step in isoleucine and valine biosynthesis and is the target of several classes of inhibitors, localizes to the mitochondria; expression of the gene is under general amino acid control; Belongs to the TPP enzyme family

Top 10 interactors (score): ILV3 (0.999); ILV5 (0.999); ILV6 (0.999); ILV1 (0.995); LEU2 (0.993); LEU4 (0.992); BAT2 (0.973); LEU9 (0.971); CHA1 (0.958); LEU1 (0.946); MAE1 (0.934); PDB1 (0.928); CYB2 (0.915); TRP5 (0.899); PYC2 (0.879); PDA1 (0.877); MET2 (0.873); CDC19 (0.868); PYK2 (0.843); GDH1 (0.841)

Homologues (species, bitscore): HACL1 (Homo sapiens, 130.2); Hacl1 (Mus musculus, 134.0); hacl1 (Danio rerio, 129.0); hacl1 (Xenopus tropicalis, 127.5); CG11208 (Drosophila melanogaster, 132.9); B0334.3 (Caenorhabditis elegans, 134.0); CSR1 (Arabidopsis thaliana, 458.8)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005307.1:522258-524321:+ gene-YMR108W_AKU4011 rna-NM_001182608.1_AKU4011 cds-NP_013826.1_AKU4011 99.7 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000201.1:18515-20578:- gene-YMR108W_BG1 rna-NM_001182608.1_BG1 cds-NP_013826.1_BG1 99.8 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005515.1:464455-466518:+ gene-YMR108W_Bruggeman rna-NM_001182608.1_Bruggeman cds-NP_013826.1_Bruggeman 99.6 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005531.1:464760-466823:+ gene-YMR108W_CAT1 rna-NM_001182608.1_CAT1 cds-NP_013826.1_CAT1 99.8 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005371.1:455701-457764:+ gene-YMR108W_CBS1585 rna-NM_001182608.1_CBS1585 cds-NP_013826.1_CBS1585 99.7 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005355.1:460628-462691:+ gene-YMR108W_CBS436 rna-NM_001182608.1_CBS436 cds-NP_013826.1_CBS436 99.7 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005339.1:568309-570372:+ gene-YMR108W_CBS6412 rna-NM_001182608.1_CBS6412 cds-NP_013826.1_CBS6412 99.7 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005323.1:454462-456525:+ gene-YMR108W_CBS6413 rna-NM_001182608.1_CBS6413 cds-NP_013826.1_CBS6413 99.7 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001534.1:478610-480673:+ gene-YMR108W_CENPK1137D rna-NM_001182608.1_CENPK1137D cds-NP_013826.1_CENPK1137D 99.4 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005483.1:455089-457152:+ gene-YMR108W_EthanolRed rna-NM_001182608.1_EthanolRed cds-NP_013826.1_EthanolRed 99.6 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005547.1:459099-461162:+ gene-YMR108W_FaliES1 rna-NM_001182608.1_FaliES1 cds-NP_013826.1_FaliES1 99.7 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000380.1:18394-20457:- gene-YMR108W_JAY291 rna-NM_001182608.1_JAY291 cds-NP_013826.1_JAY291 99.8 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005419.1:461376-463439:+ gene-YMR108W_MUCL30387 rna-NM_001182608.1_MUCL30387 cds-NP_013826.1_MUCL30387 99.6 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005451.1:465365-467428:+ gene-YMR108W_MUCL30388 rna-NM_001182608.1_MUCL30388 cds-NP_013826.1_MUCL30388 99.6 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005291.1:455502-457565:+ gene-YMR108W_MUCL39482 rna-NM_001182608.1_MUCL39482 cds-NP_013826.1_MUCL39482 99.7 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005435.1:462280-464343:+ gene-YMR108W_MUCL42920 rna-NM_001182608.1_MUCL42920 cds-NP_013826.1_MUCL42920 99.7 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011822.1:484038-486101:+ gene-YMR108W_NCIM3186 rna-NM_001182608.1_NCIM3186 cds-NP_013826.1_NCIM3186 99.3 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005275.1:455398-457461:+ gene-YMR108W_NCYC1407 rna-NM_001182608.1_NCYC1407 cds-NP_013826.1_NCYC1407 99.7 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994152.1:461226-463289:+ gene-YMR108W_PE2H3 rna-NM_001182608.1_PE2H3 cds-NP_013826.1_PE2H3 99.8 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999884.1:467321-469384:+ gene-YMR108W_PE2H4 rna-NM_001182608.1_PE2H4 cds-NP_013826.1_PE2H4 99.8 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001145.3:484084-486147:+ gene-YMR108W_S288C rna-NM_001182608.1_S288C cds-NP_013826.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000048.1:85434-87497:- gene-YMR108W_SA1 rna-NM_001182608.1_SA1 cds-NP_013826.1_SA1 99.8 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005499.1:456075-458138:+ gene-YMR108W_ThermosaccDry rna-NM_001182608.1_ThermosaccDry cds-NP_013826.1_ThermosaccDry 99.6 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005467.1:467812-469875:+ gene-YMR108W_VR1 rna-NM_001182608.1_VR1 cds-NP_013826.1_VR1 99.8 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000027.1:432108-434171:+ gene-YMR108W_ZTW1 rna-NM_001182608.1_ZTW1 cds-NP_013826.1_ZTW1 99.6 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047499.1:469069-471132:+ gene-YMR108W_Sparadoxus rna-NM_001182608.1_Sparadoxus cds-NP_013826.1_Sparadoxus 92.7 100.0 Verified 1 1 1 False True False False False

Additional files