Gene name: IKI1
Reference locus (S288C): YHR187W
Gene biotype: protein_coding
Description: Subunit of hexameric RecA-like ATPase Elp456 Elongator subcomplex; which is required for modification of wobble nucleosides in tRNA; iki1 mutations confer resistance to the K. lactis toxin zymocin
Top 10 interactors (score): ELP3 (0.999); IKI3 (0.999); ELP4 (0.999); ELP2 (0.999); ELP6 (0.999); KTI12 (0.966); HHF2 (0.85); HHF1 (0.85); HHT1 (0.845); HHT2 (0.842); NCS6 (0.815); NCS2 (0.711); URM1 (0.7); TAN1 (0.573); TRM10 (0.526); KTI11 (0.507); TUM1 (0.5); SAS3 (0.497); BMT5 (0.495); UBA4 (0.491)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:468070-468999:+ | gene-YHR187W_AKU4011 | rna-NM_001179318.3_AKU4011 | cds-NP_012057.3_AKU4011 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000141.1:48750-49679:- | gene-YHR187W_BG1 | rna-NM_001179318.3_BG1 | cds-NP_012057.3_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:475312-476241:+ | gene-YHR187W_Bruggeman | rna-NM_001179318.3_Bruggeman | cds-NP_012057.3_Bruggeman | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:471587-472516:+ | gene-YHR187W_CAT1 | rna-NM_001179318.3_CAT1 | cds-NP_012057.3_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:467522-468451:+ | gene-YHR187W_CBS1585 | rna-NM_001179318.3_CBS1585 | cds-NP_012057.3_CBS1585 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:465462-466391:+ | gene-YHR187W_CBS436 | rna-NM_001179318.3_CBS436 | cds-NP_012057.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:467621-468550:+ | gene-YHR187W_CBS6412 | rna-NM_001179318.3_CBS6412 | cds-NP_012057.3_CBS6412 | 98.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:468912-469841:+ | gene-YHR187W_CBS6413 | rna-NM_001179318.3_CBS6413 | cds-NP_012057.3_CBS6413 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:474178-475107:+ | gene-YHR187W_CENPK1137D | rna-NM_001179318.3_CENPK1137D | cds-NP_012057.3_CENPK1137D | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:526609-527538:+ | gene-YHR187W_EthanolRed | rna-NM_001179318.3_EthanolRed | cds-NP_012057.3_EthanolRed | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:469053-469982:+ | gene-YHR187W_FaliES1 | rna-NM_001179318.3_FaliES1 | cds-NP_012057.3_FaliES1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000147.1:14213-15142:+ | gene-YHR187W_JAY291 | rna-NM_001179318.3_JAY291 | cds-NP_012057.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:476638-477567:+ | gene-YHR187W_MUCL30387 | rna-NM_001179318.3_MUCL30387 | cds-NP_012057.3_MUCL30387 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:476061-476990:+ | gene-YHR187W_MUCL30388 | rna-NM_001179318.3_MUCL30388 | cds-NP_012057.3_MUCL30388 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:467433-468362:+ | gene-YHR187W_MUCL39482 | rna-NM_001179318.3_MUCL39482 | cds-NP_012057.3_MUCL39482 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:475377-476306:+ | gene-YHR187W_MUCL42920 | rna-NM_001179318.3_MUCL42920 | cds-NP_012057.3_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:480872-481801:+ | gene-YHR187W_NCIM3186 | rna-NM_001179318.3_NCIM3186 | cds-NP_012057.3_NCIM3186 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:469896-470825:+ | gene-YHR187W_NCYC1407 | rna-NM_001179318.3_NCYC1407 | cds-NP_012057.3_NCYC1407 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:469052-469981:+ | gene-YHR187W_PE2H3 | rna-NM_001179318.3_PE2H3 | cds-NP_012057.3_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:476479-477408:+ | gene-YHR187W_PE2H4 | rna-NM_001179318.3_PE2H4 | cds-NP_012057.3_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:480990-481919:+ | gene-YHR187W_S288C | rna-NM_001179318.3_S288C | cds-NP_012057.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000079.1:29139-30068:+ | gene-YHR187W_SA1 | rna-NM_001179318.3_SA1 | cds-NP_012057.3_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:470136-471065:+ | gene-YHR187W_ThermosaccDry | rna-NM_001179318.3_ThermosaccDry | cds-NP_012057.3_ThermosaccDry | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:479354-480283:+ | gene-YHR187W_VR1 | rna-NM_001179318.3_VR1 | cds-NP_012057.3_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:460371-461300:+ | gene-YHR187W_ZTW1 | rna-NM_001179318.3_ZTW1 | cds-NP_012057.3_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:467072-468001:+ | gene-YHR187W_Sparadoxus | rna-NM_001179318.3_Sparadoxus | cds-NP_012057.3_Sparadoxus | 88.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |