Gene name: IFM1
Reference locus (S288C): YOL023W
Gene biotype: protein_coding
Description: Mitochondrial translation initiation factor 2
Top 10 interactors (score): MSE1 (0.967); FMT1 (0.945); MEF1 (0.912); GCN2 (0.907); MRPS9 (0.902); MRPS16 (0.902); RRF1 (0.889); MEF2 (0.887); MSD1 (0.88); MRPS5 (0.875); NAM2 (0.866); RSM24 (0.863); MRP4 (0.863); RPS3 (0.849); MTG2 (0.848); NIP1 (0.839); TIF11 (0.832); RPL5 (0.828); MRPS28 (0.813); PET309 (0.799)
Homologues (species, bitscore): MTIF2 (Homo sapiens, 369.8); Mtif2 (Mus musculus, 369.4); mtif2 (Danio rerio, 377.1); MTIF2 (Xenopus tropicalis, 383.6); CG12413 (Drosophila melanogaster, 354.0); F46B6.6 (Caenorhabditis elegans, 319.7); AT4G11160 (Arabidopsis thaliana, 346.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:262444-264474:+ | gene-YOL023W_AKU4011 | rna-NM_001183277.1_AKU4011 | cds-NP_014619.1_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000152.1:78032-80062:+ | gene-YOL023W_BG1 | rna-NM_001183277.1_BG1 | cds-NP_014619.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:265269-267299:+ | gene-YOL023W_Bruggeman | rna-NM_001183277.1_Bruggeman | cds-NP_014619.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:263145-265175:+ | gene-YOL023W_CAT1 | rna-NM_001183277.1_CAT1 | cds-NP_014619.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:257122-259152:+ | gene-YOL023W_CBS1585 | rna-NM_001183277.1_CBS1585 | cds-NP_014619.1_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:261361-263391:+ | gene-YOL023W_CBS436 | rna-NM_001183277.1_CBS436 | cds-NP_014619.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:256478-258508:+ | gene-YOL023W_CBS6412 | rna-NM_001183277.1_CBS6412 | cds-NP_014619.1_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:264005-266035:+ | gene-YOL023W_CBS6413 | rna-NM_001183277.1_CBS6413 | cds-NP_014619.1_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:277755-279785:+ | gene-YOL023W_CENPK1137D | rna-NM_001183277.1_CENPK1137D | cds-NP_014619.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:259271-261301:+ | gene-YOL023W_EthanolRed | rna-NM_001183277.1_EthanolRed | cds-NP_014619.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:262598-264628:+ | gene-YOL023W_FaliES1 | rna-NM_001183277.1_FaliES1 | cds-NP_014619.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000018.1:2111-4141:- | gene-YOL023W_JAY291 | rna-NM_001183277.1_JAY291 | cds-NP_014619.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:269202-271232:+ | gene-YOL023W_MUCL30387 | rna-NM_001183277.1_MUCL30387 | cds-NP_014619.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:272644-274674:+ | gene-YOL023W_MUCL30388 | rna-NM_001183277.1_MUCL30388 | cds-NP_014619.1_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:264607-266637:+ | gene-YOL023W_MUCL39482 | rna-NM_001183277.1_MUCL39482 | cds-NP_014619.1_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:279527-281557:+ | gene-YOL023W_MUCL42920 | rna-NM_001183277.1_MUCL42920 | cds-NP_014619.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:277945-279975:+ | gene-YOL023W_NCIM3186 | rna-NM_001183277.1_NCIM3186 | cds-NP_014619.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:271339-273369:+ | gene-YOL023W_NCYC1407 | rna-NM_001183277.1_NCYC1407 | cds-NP_014619.1_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:253726-255756:+ | gene-YOL023W_PE2H3 | rna-NM_001183277.1_PE2H3 | cds-NP_014619.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:264700-266730:+ | gene-YOL023W_PE2H4 | rna-NM_001183277.1_PE2H4 | cds-NP_014619.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:278056-280086:+ | gene-YOL023W_S288C | rna-NM_001183277.1_S288C | cds-NP_014619.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000001.1:246052-248082:+ | gene-YOL023W_SA1 | rna-NM_001183277.1_SA1 | cds-NP_014619.1_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:261169-263199:+ | gene-YOL023W_ThermosaccDry | rna-NM_001183277.1_ThermosaccDry | cds-NP_014619.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:261206-263236:+ | gene-YOL023W_VR1 | rna-NM_001183277.1_VR1 | cds-NP_014619.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000031.1:260764-262794:+ | gene-YOL023W_ZTW1 | rna-NM_001183277.1_ZTW1 | cds-NP_014619.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:269136-271178:+ | gene-YOL023W_Sparadoxus | rna-NM_001183277.1_Sparadoxus | cds-NP_014619.1_Sparadoxus | 90.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |