IDS2 (YJL146W)


Gene profile

Gene name: IDS2
Reference locus (S288C): YJL146W
Gene biotype: protein_coding

Description: Protein involved in modulation of Ime2p activity during meiosis; appears to act indirectly to promote Ime2p-mediated late meiotic functions; found in growing cells and degraded during sporulation

Top 10 interactors (score): YJL070C (0.85); IME2 (0.787); SPS2 (0.744); PET127 (0.696); PTC3 (0.678); PEP4 (0.636); BBC1 (0.629); HBN1 (0.612); SPS1 (0.61); PTC2 (0.607); AHA1 (0.587); PTC7 (0.571); RIM4 (0.569); SPS100 (0.565); IME1 (0.563); RIM9 (0.499); SPO13 (0.487); SGT1 (0.485); MSP1 (0.468); YHI9 (0.454)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005304.1:131587-132996:+ gene-YJL146W_AKU4011 rna-NM_001181579.1_AKU4011 cds-NP_012389.1_AKU4011 99.5 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000190.1:480726-482135:- gene-YJL146W_BG1 rna-NM_001181579.1_BG1 cds-NP_012389.1_BG1 99.5 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005512.1:143422-144831:+ gene-YJL146W_Bruggeman rna-NM_001181579.1_Bruggeman cds-NP_012389.1_Bruggeman 99.6 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005528.1:147205-148614:+ gene-YJL146W_CAT1 rna-NM_001181579.1_CAT1 cds-NP_012389.1_CAT1 99.7 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005368.1:137221-138630:+ gene-YJL146W_CBS1585 rna-NM_001181579.1_CBS1585 cds-NP_012389.1_CBS1585 99.5 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005352.1:161972-163381:+ gene-YJL146W_CBS436 rna-NM_001181579.1_CBS436 cds-NP_012389.1_CBS436 99.8 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005336.1:133630-135039:+ gene-YJL146W_CBS6412 rna-NM_001181579.1_CBS6412 cds-NP_012389.1_CBS6412 99.5 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005320.1:134693-136102:+ gene-YJL146W_CBS6413 rna-NM_001181579.1_CBS6413 cds-NP_012389.1_CBS6413 99.6 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001531.1:125680-127089:+ gene-YJL146W_CENPK1137D rna-NM_001181579.1_CENPK1137D cds-NP_012389.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005480.1:135745-137154:+ gene-YJL146W_EthanolRed rna-NM_001181579.1_EthanolRed cds-NP_012389.1_EthanolRed 99.5 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005544.1:141223-142632:+ gene-YJL146W_FaliES1 rna-NM_001181579.1_FaliES1 cds-NP_012389.1_FaliES1 99.5 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000099.1:22400-23809:+ gene-YJL146W_JAY291 rna-NM_001181579.1_JAY291 cds-NP_012389.1_JAY291 99.5 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005416.1:145691-147100:+ gene-YJL146W_MUCL30387 rna-NM_001181579.1_MUCL30387 cds-NP_012389.1_MUCL30387 99.6 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005448.1:141743-143152:+ gene-YJL146W_MUCL30388 rna-NM_001181579.1_MUCL30388 cds-NP_012389.1_MUCL30388 99.7 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005288.1:135963-137372:+ gene-YJL146W_MUCL39482 rna-NM_001181579.1_MUCL39482 cds-NP_012389.1_MUCL39482 99.5 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005432.1:141482-142891:+ gene-YJL146W_MUCL42920 rna-NM_001181579.1_MUCL42920 cds-NP_012389.1_MUCL42920 99.6 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011819.1:143271-144680:+ gene-YJL146W_NCIM3186 rna-NM_001181579.1_NCIM3186 cds-NP_012389.1_NCIM3186 98.9 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005272.1:134572-135981:+ gene-YJL146W_NCYC1407 rna-NM_001181579.1_NCYC1407 cds-NP_012389.1_NCYC1407 99.5 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994149.1:147378-148787:+ gene-YJL146W_PE2H3 rna-NM_001181579.1_PE2H3 cds-NP_012389.1_PE2H3 99.6 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999881.1:147020-148429:+ gene-YJL146W_PE2H4 rna-NM_001181579.1_PE2H4 cds-NP_012389.1_PE2H4 99.5 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001142.9:143292-144701:+ gene-YJL146W_S288C rna-NM_001181579.1_S288C cds-NP_012389.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000022.1:8913-10322:- gene-YJL146W_SA1 rna-NM_001181579.1_SA1 cds-NP_012389.1_SA1 99.8 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005496.1:134414-135823:+ gene-YJL146W_ThermosaccDry rna-NM_001181579.1_ThermosaccDry cds-NP_012389.1_ThermosaccDry 99.5 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005464.1:141495-142904:+ gene-YJL146W_VR1 rna-NM_001181579.1_VR1 cds-NP_012389.1_VR1 99.5 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000021.1:121705-123114:+ gene-YJL146W_ZTW1 rna-NM_001181579.1_ZTW1 cds-NP_012389.1_ZTW1 99.1 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047496.1:146991-148400:+ gene-YJL146W_Sparadoxus rna-NM_001181579.1_Sparadoxus cds-NP_012389.1_Sparadoxus 88.8 100.0 Verified 1 1 1 False True False False False

Additional files