Gene name: IDP1
Reference locus (S288C): YDL066W
Gene biotype: protein_coding
Description: Mitochondrial NADP-specific isocitrate dehydrogenase; catalyzes the oxidation of isocitrate to alpha-ketoglutarate; not required for mitochondrial respiration and may function to divert alpha-ketoglutarate to biosynthetic processes
Top 10 interactors (score): IDH1 (0.998); IDH2 (0.998); ACO1 (0.987); KGD1 (0.983); AAT1 (0.966); GDH1 (0.91); ALT1 (0.883); FUM1 (0.882); GDH2 (0.881); AAT2 (0.879); GLT1 (0.871); GDH3 (0.867); MDH3 (0.856); ARG4 (0.846); MDH1 (0.843); ALT2 (0.834); ADE13 (0.827); CIT3 (0.823); UGA2 (0.819); MAE1 (0.816)
Homologues (species, bitscore): IDH1 (Homo sapiens, 552.4); Idh1 (Mus musculus, 551.2); idh1 (Danio rerio, 543.5); idh1 (Xenopus tropicalis, 542.0); Idh (Drosophila melanogaster, 537.7); idh-2 (Caenorhabditis elegans, 540.8); AT5G14590 (Arabidopsis thaliana, 562.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:319438-320724:+ | gene-YDL066W_AKU4011 | rna-NM_001180125.1_AKU4011 | cds-NP_010217.1_AKU4011 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000102.1:229332-230618:- | gene-YDL066W_BG1 | rna-NM_001180125.1_BG1 | cds-NP_010217.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:337222-338508:+ | gene-YDL066W_Bruggeman | rna-NM_001180125.1_Bruggeman | cds-NP_010217.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:333590-334876:+ | gene-YDL066W_CAT1 | rna-NM_001180125.1_CAT1 | cds-NP_010217.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:317691-318977:+ | gene-YDL066W_CBS1585 | rna-NM_001180125.1_CBS1585 | cds-NP_010217.1_CBS1585 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:334385-335671:+ | gene-YDL066W_CBS436 | rna-NM_001180125.1_CBS436 | cds-NP_010217.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:315779-317065:+ | gene-YDL066W_CBS6412 | rna-NM_001180125.1_CBS6412 | cds-NP_010217.1_CBS6412 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:335770-337056:+ | gene-YDL066W_CBS6413 | rna-NM_001180125.1_CBS6413 | cds-NP_010217.1_CBS6413 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:333658-334944:+ | gene-YDL066W_CENPK1137D | rna-NM_001180125.1_CENPK1137D | cds-NP_010217.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:330241-331527:+ | gene-YDL066W_EthanolRed | rna-NM_001180125.1_EthanolRed | cds-NP_010217.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:336488-337774:+ | gene-YDL066W_FaliES1 | rna-NM_001180125.1_FaliES1 | cds-NP_010217.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000010.1:106498-107784:+ | gene-YDL066W_JAY291 | rna-NM_001180125.1_JAY291 | cds-NP_010217.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:334613-335899:+ | gene-YDL066W_MUCL30387 | rna-NM_001180125.1_MUCL30387 | cds-NP_010217.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:325739-327025:+ | gene-YDL066W_MUCL30388 | rna-NM_001180125.1_MUCL30388 | cds-NP_010217.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:318795-320081:+ | gene-YDL066W_MUCL39482 | rna-NM_001180125.1_MUCL39482 | cds-NP_010217.1_MUCL39482 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:240813-242099:+ | gene-YDL066W_MUCL42920 | rna-NM_001180125.1_MUCL42920 | cds-NP_010217.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:334758-336044:+ | gene-YDL066W_NCIM3186 | rna-NM_001180125.1_NCIM3186 | cds-NP_010217.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:318819-320105:+ | gene-YDL066W_NCYC1407 | rna-NM_001180125.1_NCYC1407 | cds-NP_010217.1_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:325618-326904:+ | gene-YDL066W_PE2H3 | rna-NM_001180125.1_PE2H3 | cds-NP_010217.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:325617-326903:+ | gene-YDL066W_PE2H4 | rna-NM_001180125.1_PE2H4 | cds-NP_010217.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:334835-336121:+ | gene-YDL066W_S288C | rna-NM_001180125.1_S288C | cds-NP_010217.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000010.1:98812-100098:- | gene-YDL066W_SA1 | rna-NM_001180125.1_SA1 | cds-NP_010217.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:335940-337226:+ | gene-YDL066W_ThermosaccDry | rna-NM_001180125.1_ThermosaccDry | cds-NP_010217.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:338505-339791:+ | gene-YDL066W_VR1 | rna-NM_001180125.1_VR1 | cds-NP_010217.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:333877-335163:+ | gene-YDL066W_ZTW1 | rna-NM_001180125.1_ZTW1 | cds-NP_010217.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:336003-337292:+ | gene-YDL066W_Sparadoxus | rna-NM_001180125.1_Sparadoxus | cds-NP_010217.1_Sparadoxus | 93.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |