Gene name: IDI1
Reference locus (S288C): YPL117C
Gene biotype: protein_coding
Description: Isopentenyl-diphosphate Delta-isomerase; Isopentenyl diphosphate:dimethylallyl diphosphate isomerase; catalyzes an essential activation step in the isoprenoid biosynthetic pathway; required for viability; isopentenyl diphosphate:dimethylallyl diphosphate isomerase is also known as IPP isomerase; Belongs to the IPP isomerase type 1 family
Top 10 interactors (score): ERG20 (0.999); ERG9 (0.999); MVD1 (0.999); ERG13 (0.995); BTS1 (0.994); ERG12 (0.994); ERG26 (0.992); ERG10 (0.99); ERG1 (0.99); ERG7 (0.986); ERG11 (0.982); ERG8 (0.98); HMG1 (0.971); ERG25 (0.969); ERG27 (0.962); HMG2 (0.952); ERG3 (0.873); ERG6 (0.834); MRPL37 (0.766); ERG4 (0.74)
Homologues (species, bitscore): IDI1 (Homo sapiens, 216.1); Idi1 (Mus musculus, 214.5); idi1 (Danio rerio, 206.5); idi1 (Xenopus tropicalis, 201.4); CG5919 (Drosophila melanogaster, 183.0); idi-1 (Caenorhabditis elegans, 159.1); IPP1 (Arabidopsis thaliana, 188.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:305505-306371:- | gene-YPL117C_AKU4011 | rna-NM_001183931.1_AKU4011 | cds-NP_015208.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:511260-512126:- | gene-YPL117C_BG1 | rna-NM_001183931.1_BG1 | cds-NP_015208.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:331509-332375:- | gene-YPL117C_Bruggeman | rna-NM_001183931.1_Bruggeman | cds-NP_015208.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:328176-329042:- | gene-YPL117C_CAT1 | rna-NM_001183931.1_CAT1 | cds-NP_015208.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:309578-310444:- | gene-YPL117C_CBS1585 | rna-NM_001183931.1_CBS1585 | cds-NP_015208.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:324252-325118:- | gene-YPL117C_CBS436 | rna-NM_001183931.1_CBS436 | cds-NP_015208.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:314247-315113:- | gene-YPL117C_CBS6412 | rna-NM_001183931.1_CBS6412 | cds-NP_015208.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:306214-307080:- | gene-YPL117C_CBS6413 | rna-NM_001183931.1_CBS6413 | cds-NP_015208.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:327797-328663:- | gene-YPL117C_CENPK1137D | rna-NM_001183931.1_CENPK1137D | cds-NP_015208.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:304195-305061:- | gene-YPL117C_EthanolRed | rna-NM_001183931.1_EthanolRed | cds-NP_015208.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:311787-312653:- | gene-YPL117C_FaliES1 | rna-NM_001183931.1_FaliES1 | cds-NP_015208.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000007.1:53165-54031:+ | gene-YPL117C_JAY291 | rna-NM_001183931.1_JAY291 | cds-NP_015208.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:322749-323615:- | gene-YPL117C_MUCL30387 | rna-NM_001183931.1_MUCL30387 | cds-NP_015208.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:321019-321885:- | gene-YPL117C_MUCL30388 | rna-NM_001183931.1_MUCL30388 | cds-NP_015208.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:302907-303773:- | gene-YPL117C_MUCL39482 | rna-NM_001183931.1_MUCL39482 | cds-NP_015208.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:360149-361015:- | gene-YPL117C_MUCL42920 | rna-NM_001183931.1_MUCL42920 | cds-NP_015208.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:327847-328713:- | gene-YPL117C_NCIM3186 | rna-NM_001183931.1_NCIM3186 | cds-NP_015208.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:309360-310226:- | gene-YPL117C_NCYC1407 | rna-NM_001183931.1_NCYC1407 | cds-NP_015208.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:316851-317717:- | gene-YPL117C_PE2H3 | rna-NM_001183931.1_PE2H3 | cds-NP_015208.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:316474-317340:- | gene-YPL117C_PE2H4 | rna-NM_001183931.1_PE2H4 | cds-NP_015208.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:327864-328730:- | gene-YPL117C_S288C | rna-NM_001183931.1_S288C | cds-NP_015208.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000012.1:44950-45816:+ | gene-YPL117C_SA1 | rna-NM_001183931.1_SA1 | cds-NP_015208.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:311585-312451:- | gene-YPL117C_ThermosaccDry | rna-NM_001183931.1_ThermosaccDry | cds-NP_015208.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:326563-327429:- | gene-YPL117C_VR1 | rna-NM_001183931.1_VR1 | cds-NP_015208.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:310910-311776:- | gene-YPL117C_ZTW1 | rna-NM_001183931.1_ZTW1 | cds-NP_015208.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:312610-313476:- | gene-YPL117C_Sparadoxus | rna-NM_001183931.1_Sparadoxus | cds-NP_015208.1_Sparadoxus | 92.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |