Gene name: IDH2
Reference locus (S288C): YOR136W
Gene biotype: protein_coding
Description: Subunit of mitochondrial NAD(+)-dependent isocitrate dehydrogenase; complex catalyzes the oxidation of isocitrate to alpha-ketoglutarate in the TCA cycle; phosphorylated; Belongs to the isocitrate and isopropylmalate dehydrogenases family
Top 10 interactors (score): ACO1 (0.999); IDH1 (0.999); KGD1 (0.998); CIT1 (0.998); IDP1 (0.998); LSC2 (0.998); MDH1 (0.998); CIT2 (0.995); ACO2 (0.995); KGD2 (0.994); FUM1 (0.994); CIT3 (0.993); IDP2 (0.992); LSC1 (0.988); IDP3 (0.988); MDH3 (0.987); MAS1 (0.985); LPD1 (0.984); SES1 (0.962); ATP1 (0.96)
Homologues (species, bitscore): IDH3A (Homo sapiens, 357.8); Idh3a (Mus musculus, 359.8); idh3a (Danio rerio, 357.8); idh3a (Xenopus tropicalis, 357.1); l(1)G0156 (Drosophila melanogaster, 388.3); idha-1 (Caenorhabditis elegans, 383.6); IDH-V (Arabidopsis thaliana, 362.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:583700-584809:+ | gene-YOR136W_AKU4011 | rna-NM_001183555.1_AKU4011 | cds-NP_014779.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000171.1:13841-14950:- | gene-YOR136W_BG1 | rna-NM_001183555.1_BG1 | cds-NP_014779.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:567859-568968:+ | gene-YOR136W_Bruggeman | rna-NM_001183555.1_Bruggeman | cds-NP_014779.1_Bruggeman | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:567884-568993:+ | gene-YOR136W_CAT1 | rna-NM_001183555.1_CAT1 | cds-NP_014779.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:559880-560989:+ | gene-YOR136W_CBS1585 | rna-NM_001183555.1_CBS1585 | cds-NP_014779.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:564586-565695:+ | gene-YOR136W_CBS436 | rna-NM_001183555.1_CBS436 | cds-NP_014779.1_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:557369-558478:+ | gene-YOR136W_CBS6412 | rna-NM_001183555.1_CBS6412 | cds-NP_014779.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:566161-567270:+ | gene-YOR136W_CBS6413 | rna-NM_001183555.1_CBS6413 | cds-NP_014779.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:580006-581115:+ | gene-YOR136W_CENPK1137D | rna-NM_001183555.1_CENPK1137D | cds-NP_014779.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:560017-561126:+ | gene-YOR136W_EthanolRed | rna-NM_001183555.1_EthanolRed | cds-NP_014779.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:564870-565979:+ | gene-YOR136W_FaliES1 | rna-NM_001183555.1_FaliES1 | cds-NP_014779.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000070.1:77572-78681:- | gene-YOR136W_JAY291 | rna-NM_001183555.1_JAY291 | cds-NP_014779.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:572420-573529:+ | gene-YOR136W_MUCL30387 | rna-NM_001183555.1_MUCL30387 | cds-NP_014779.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:578500-579609:+ | gene-YOR136W_MUCL30388 | rna-NM_001183555.1_MUCL30388 | cds-NP_014779.1_MUCL30388 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:567955-569064:+ | gene-YOR136W_MUCL39482 | rna-NM_001183555.1_MUCL39482 | cds-NP_014779.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:583550-584659:+ | gene-YOR136W_MUCL42920 | rna-NM_001183555.1_MUCL42920 | cds-NP_014779.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:580139-581248:+ | gene-YOR136W_NCIM3186 | rna-NM_001183555.1_NCIM3186 | cds-NP_014779.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:574221-575330:+ | gene-YOR136W_NCYC1407 | rna-NM_001183555.1_NCYC1407 | cds-NP_014779.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:572729-573838:+ | gene-YOR136W_PE2H3 | rna-NM_001183555.1_PE2H3 | cds-NP_014779.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:583106-584215:+ | gene-YOR136W_PE2H4 | rna-NM_001183555.1_PE2H4 | cds-NP_014779.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:580250-581359:+ | gene-YOR136W_S288C | rna-NM_001183555.1_S288C | cds-NP_014779.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000006.1:2714-3823:+ | gene-YOR136W_SA1 | rna-NM_001183555.1_SA1 | cds-NP_014779.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:564053-565162:+ | gene-YOR136W_ThermosaccDry | rna-NM_001183555.1_ThermosaccDry | cds-NP_014779.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:627726-628835:+ | gene-YOR136W_VR1 | rna-NM_001183555.1_VR1 | cds-NP_014779.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:297498-298607:+ | gene-YOR136W_ZTW1 | rna-NM_001183555.1_ZTW1 | cds-NP_014779.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:568887-569996:+ | gene-YOR136W_Sparadoxus | rna-NM_001183555.1_Sparadoxus | cds-NP_014779.1_Sparadoxus | 91.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |