ICY1 (YMR195W)


Gene profile

Gene name: ICY1
Reference locus (S288C): YMR195W
Gene biotype: protein_coding

Description: Interacting with cytoskeleton protein 1; Protein of unknown function; required for viability in rich media of cells lacking mitochondrial DNA; mutants have an invasive growth defect with elongated morphology; induced by amino acid starvation; ICY1 has a paralog, ICY2, that arose from the whole genome duplication

Top 10 interactors (score): AFI1 (0.748); YNL144C (0.712); AIM41 (0.711); NNR1 (0.706); RSN1 (0.692); YKL162C (0.691); QRI7 (0.679); THI73 (0.678); YJL193W (0.671); YNL208W (0.657); YPR127W (0.656); HOR7 (0.619); OMS1 (0.612); YDR133C (0.591); YIG1 (0.571); ACA1 (0.568); LAM4 (0.567); POR2 (0.566); AQY1 (0.526); YML057C-A (0.522)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005307.1:693957-694337:+ gene-YMR195W_AKU4011 rna-NM_001182702.1_AKU4011 cds-NP_013922.1_AKU4011 98.9 99.2 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000069.1:260245-260625:- gene-YMR195W_BG1 rna-NM_001182702.1_BG1 cds-NP_013922.1_BG1 99.2 99.2 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005515.1:638185-638565:+ gene-YMR195W_Bruggeman rna-NM_001182702.1_Bruggeman cds-NP_013922.1_Bruggeman 98.9 99.2 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005531.1:641434-641814:+ gene-YMR195W_CAT1 rna-NM_001182702.1_CAT1 cds-NP_013922.1_CAT1 99.2 99.2 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005371.1:626214-626594:+ gene-YMR195W_CBS1585 rna-NM_001182702.1_CBS1585 cds-NP_013922.1_CBS1585 98.9 99.2 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005355.1:630473-630853:+ gene-YMR195W_CBS436 rna-NM_001182702.1_CBS436 cds-NP_013922.1_CBS436 98.9 99.2 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005339.1:737772-738152:+ gene-YMR195W_CBS6412 rna-NM_001182702.1_CBS6412 cds-NP_013922.1_CBS6412 98.6 99.2 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005323.1:625364-625744:+ gene-YMR195W_CBS6413 rna-NM_001182702.1_CBS6413 cds-NP_013922.1_CBS6413 98.6 99.2 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001534.1:648723-649106:+ gene-YMR195W_CENPK1137D rna-NM_001182702.1_CENPK1137D cds-NP_013922.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005486.1:686404-686784:+ gene-YMR195W_EthanolRed rna-NM_001182702.1_EthanolRed cds-NP_013922.1_EthanolRed 98.6 99.2 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005547.1:632060-632440:+ gene-YMR195W_FaliES1 rna-NM_001182702.1_FaliES1 cds-NP_013922.1_FaliES1 98.9 99.2 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000141.1:153562-153942:- gene-YMR195W_JAY291 rna-NM_001182702.1_JAY291 cds-NP_013922.1_JAY291 99.2 99.2 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005419.1:631732-632112:+ gene-YMR195W_MUCL30387 rna-NM_001182702.1_MUCL30387 cds-NP_013922.1_MUCL30387 98.9 99.2 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005451.1:638507-638887:+ gene-YMR195W_MUCL30388 rna-NM_001182702.1_MUCL30388 cds-NP_013922.1_MUCL30388 98.4 99.2 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005291.1:627286-627666:+ gene-YMR195W_MUCL39482 rna-NM_001182702.1_MUCL39482 cds-NP_013922.1_MUCL39482 98.9 99.2 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005435.1:634627-635007:+ gene-YMR195W_MUCL42920 rna-NM_001182702.1_MUCL42920 cds-NP_013922.1_MUCL42920 98.9 99.2 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011822.1:653988-654371:+ gene-YMR195W_NCIM3186 rna-NM_001182702.1_NCIM3186 cds-NP_013922.1_NCIM3186 99.7 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005275.1:626937-627317:+ gene-YMR195W_NCYC1407 rna-NM_001182702.1_NCYC1407 cds-NP_013922.1_NCYC1407 98.9 99.2 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994152.1:636795-637175:+ gene-YMR195W_PE2H3 rna-NM_001182702.1_PE2H3 cds-NP_013922.1_PE2H3 99.2 99.2 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999884.1:637814-638194:+ gene-YMR195W_PE2H4 rna-NM_001182702.1_PE2H4 cds-NP_013922.1_PE2H4 99.2 99.2 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001145.3:654034-654417:+ gene-YMR195W_S288C rna-NM_001182702.1_S288C cds-NP_013922.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000002.1:153687-154067:- gene-YMR195W_SA1 rna-NM_001182702.1_SA1 cds-NP_013922.1_SA1 98.9 99.2 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005499.1:628186-628566:+ gene-YMR195W_ThermosaccDry rna-NM_001182702.1_ThermosaccDry cds-NP_013922.1_ThermosaccDry 98.6 99.2 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005467.1:641328-641708:+ gene-YMR195W_VR1 rna-NM_001182702.1_VR1 cds-NP_013922.1_VR1 99.2 99.2 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000028.1:43965-44345:+ gene-YMR195W_ZTW1 rna-NM_001182702.1_ZTW1 cds-NP_013922.1_ZTW1 98.6 99.2 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047499.1:646081-646461:+ gene-YMR195W_Sparadoxus rna-NM_001182702.1_Sparadoxus cds-NP_013922.1_Sparadoxus 88.0 98.9 Verified 1 1 1 False True False False False

Additional files