ICS3 (YJL077C)

Gene profile

Gene name: ICS3
Reference locus (S288C): YJL077C
Gene biotype: protein_coding

Description: Increased copper sensitivity protein 3; Protein with a role in copper homeostasis; possible role in vacuolar sorting and processing of secretory proteins; null mutants are hypersensitive to sortin2

Top 10 interactors (score): CCC2 (0.811); RIM101 (0.712)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005304.1:277530-277927:- gene-YJL077C_AKU4011 rna-NM_001181510.1_AKU4011 cds-NP_012458.1_AKU4011 97.9 100.0 Unannotated 1 1 0 False False False True False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000190.1:336586-336981:+ gene-YJL077C_BG1 rna-NM_001181510.1_BG1 cds-NP_012458.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005512.1:290068-290466:- gene-YJL077C_Bruggeman rna-NM_001181510.1_Bruggeman cds-NP_012458.1_Bruggeman 97.7 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005528.1:294169-294566:- gene-YJL077C_CAT1 rna-NM_001181510.1_CAT1 cds-NP_012458.1_CAT1 97.9 100.0 Unannotated 1 1 0 False False False True False
CBS1585 GCA_001738375.1 Sake Asia CM005368.1:289188-289585:- gene-YJL077C_CBS1585 rna-NM_001181510.1_CBS1585 cds-NP_012458.1_CBS1585 97.9 100.0 Unannotated 1 1 0 False False False True False
CBS436 GCA_001738355.1 Sake Asia CM005352.1:307198-307593:- gene-YJL077C_CBS436 rna-NM_001181510.1_CBS436 cds-NP_012458.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005336.1:278288-278685:- gene-YJL077C_CBS6412 rna-NM_001181510.1_CBS6412 cds-NP_012458.1_CBS6412 97.9 100.0 Unannotated 1 1 0 False False False True False
CBS6413 GCA_001738265.1 Sake Asia CM005320.1:279644-280041:- gene-YJL077C_CBS6413 rna-NM_001181510.1_CBS6413 cds-NP_012458.1_CBS6413 97.9 100.0 Unannotated 1 1 0 False False False True False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001531.1:277136-277531:- gene-YJL077C_CENPK1137D rna-NM_001181510.1_CENPK1137D cds-NP_012458.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005480.1:281368-281765:- gene-YJL077C_EthanolRed rna-NM_001181510.1_EthanolRed cds-NP_012458.1_EthanolRed 97.7 100.0 Unannotated 1 1 0 False False False True False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005544.1:292943-293340:- gene-YJL077C_FaliES1 rna-NM_001181510.1_FaliES1 cds-NP_012458.1_FaliES1 97.4 100.0 Unannotated 1 1 0 False False False True False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000138.1:90528-90923:- gene-YJL077C_JAY291 rna-NM_001181510.1_JAY291 cds-NP_012458.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005416.1:291229-291624:- gene-YJL077C_MUCL30387 rna-NM_001181510.1_MUCL30387 cds-NP_012458.1_MUCL30387 98.4 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005448.1:287265-287660:- gene-YJL077C_MUCL30388 rna-NM_001181510.1_MUCL30388 cds-NP_012458.1_MUCL30388 98.9 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005288.1:281940-282337:- gene-YJL077C_MUCL39482 rna-NM_001181510.1_MUCL39482 cds-NP_012458.1_MUCL39482 97.9 100.0 Unannotated 1 1 0 False False False True False
MUCL42920 GCA_001738485.1 Bread Europe CM005432.1:288107-288502:- gene-YJL077C_MUCL42920 rna-NM_001181510.1_MUCL42920 cds-NP_012458.1_MUCL42920 98.4 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011819.1:294645-295040:- gene-YJL077C_NCIM3186 rna-NM_001181510.1_NCIM3186 cds-NP_012458.1_NCIM3186 98.4 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005272.1:280636-281033:- gene-YJL077C_NCYC1407 rna-NM_001181510.1_NCYC1407 cds-NP_012458.1_NCYC1407 97.9 100.0 Unannotated 1 1 0 False False False True False
PE2H3 GCA_905220325.1 Bioethanol South America HG994149.1:292993-293388:- gene-YJL077C_PE2H3 rna-NM_001181510.1_PE2H3 cds-NP_012458.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999881.1:292637-293032:- gene-YJL077C_PE2H4 rna-NM_001181510.1_PE2H4 cds-NP_012458.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001142.9:294666-295061:- gene-YJL077C_S288C rna-NM_001181510.1_S288C cds-NP_012458.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000003.1:90555-90950:- gene-YJL077C_SA1 rna-NM_001181510.1_SA1 cds-NP_012458.1_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005496.1:286356-286753:- gene-YJL077C_ThermosaccDry rna-NM_001181510.1_ThermosaccDry cds-NP_012458.1_ThermosaccDry 97.7 100.0 Unannotated 1 1 0 False False False True False
VR1 GCA_001738595.1 Bioethanol South America CM005464.1:288532-288928:- gene-YJL077C_VR1 rna-NM_001181510.1_VR1 cds-NP_012458.1_VR1 97.9 100.0 Unannotated 1 1 0 False False False True False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000021.1:267742-268139:- gene-YJL077C_ZTW1 rna-NM_001181510.1_ZTW1 cds-NP_012458.1_ZTW1 97.9 100.0 Unannotated 1 1 0 False False False True False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047496.1:291681-292079:- gene-YJL077C_Sparadoxus rna-NM_001181510.1_Sparadoxus cds-NP_012458.1_Sparadoxus 86.0 99.2 Unannotated 1 1 0 False False False False True

Additional files