Gene name: ICP55
Reference locus (S288C): YER078C
Gene biotype: protein_coding
Description: Intermediate cleaving peptidase 55; Mitochondrial aminopeptidase; cleaves the N termini of at least 38 imported proteins after cleavage by the mitochondrial processing peptidase (MPP), thereby increasing their stability; member of the aminopeptidase P family
Top 10 interactors (score): OCT1 (0.984); APE1 (0.971); AMS1 (0.965); YHC1 (0.964); ATG19 (0.931); APE4 (0.922); ATG11 (0.892); MAS1 (0.878); DAP2 (0.866); YDR341C (0.845); MSR1 (0.845); STE13 (0.821); ATG8 (0.813); SCH9 (0.808); PRC1 (0.806); OMA1 (0.795); ATG1 (0.786); ATG13 (0.78); MAS2 (0.779); PRB1 (0.771)
Homologues (species, bitscore): XPNPEP3 (Homo sapiens, 291.2); Xpnpep3 (Mus musculus, 159.8); xpnpep3 (Danio rerio, 270.4); xpnpep3 (Xenopus tropicalis, 282.0); CG9581 (Drosophila melanogaster, 235.3); R119.2 (Caenorhabditis elegans, 164.5); AT1G09300 (Arabidopsis thaliana, 273.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:310584-312119:- | gene-YER078C_AKU4011 | rna-NM_001178969.1_AKU4011 | cds-NP_011001.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000011.1:113683-115218:+ | gene-YER078C_BG1 | rna-NM_001178969.1_BG1 | cds-NP_011001.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:320177-321712:- | gene-YER078C_Bruggeman | rna-NM_001178969.1_Bruggeman | cds-NP_011001.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:314281-315816:- | gene-YER078C_CAT1 | rna-NM_001178969.1_CAT1 | cds-NP_011001.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:310449-311984:- | gene-YER078C_CBS1585 | rna-NM_001178969.1_CBS1585 | cds-NP_011001.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:312589-314124:- | gene-YER078C_CBS436 | rna-NM_001178969.1_CBS436 | cds-NP_011001.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:309906-311441:- | gene-YER078C_CBS6412 | rna-NM_001178969.1_CBS6412 | cds-NP_011001.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:315896-317431:- | gene-YER078C_CBS6413 | rna-NM_001178969.1_CBS6413 | cds-NP_011001.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:314718-316253:- | gene-YER078C_CENPK1137D | rna-NM_001178969.1_CENPK1137D | cds-NP_011001.1_CENPK1137D | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:310928-312463:- | gene-YER078C_EthanolRed | rna-NM_001178969.1_EthanolRed | cds-NP_011001.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:311373-312908:- | gene-YER078C_FaliES1 | rna-NM_001178969.1_FaliES1 | cds-NP_011001.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000153.1:26432-27967:- | gene-YER078C_JAY291 | rna-NM_001178969.1_JAY291 | cds-NP_011001.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:315572-317107:- | gene-YER078C_MUCL30387 | rna-NM_001178969.1_MUCL30387 | cds-NP_011001.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:311243-312778:- | gene-YER078C_MUCL30388 | rna-NM_001178969.1_MUCL30388 | cds-NP_011001.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:309473-311008:- | gene-YER078C_MUCL39482 | rna-NM_001178969.1_MUCL39482 | cds-NP_011001.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:316714-318249:- | gene-YER078C_MUCL42920 | rna-NM_001178969.1_MUCL42920 | cds-NP_011001.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:316806-318341:- | gene-YER078C_NCIM3186 | rna-NM_001178969.1_NCIM3186 | cds-NP_011001.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:314537-316072:- | gene-YER078C_NCYC1407 | rna-NM_001178969.1_NCYC1407 | cds-NP_011001.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:325185-326720:- | gene-YER078C_PE2H3 | rna-NM_001178969.1_PE2H3 | cds-NP_011001.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:315126-316661:- | gene-YER078C_PE2H4 | rna-NM_001178969.1_PE2H4 | cds-NP_011001.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:316807-318342:- | gene-YER078C_S288C | rna-NM_001178969.1_S288C | cds-NP_011001.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000023.1:26446-27981:- | gene-YER078C_SA1 | rna-NM_001178969.1_SA1 | cds-NP_011001.1_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:312170-313705:- | gene-YER078C_ThermosaccDry | rna-NM_001178969.1_ThermosaccDry | cds-NP_011001.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:312865-314400:- | gene-YER078C_VR1 | rna-NM_001178969.1_VR1 | cds-NP_011001.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000009.1:309333-310868:- | gene-YER078C_ZTW1 | rna-NM_001178969.1_ZTW1 | cds-NP_011001.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:312741-314276:- | gene-YER078C_Sparadoxus | rna-NM_001178969.1_Sparadoxus | cds-NP_011001.1_Sparadoxus | 90.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |