HXT3 (YDR345C)


Gene profile

Gene name: HXT3
Reference locus (S288C): YDR345C
Gene biotype: protein_coding

Description: Mfs transporter, sp family, sugar:h+ symporter; Low affinity glucose transporter of the major facilitator superfamily; expression is induced in low or high glucose conditions; HXT3 has a paralog, HXT5, that arose from the whole genome duplication

Top 10 interactors (score): HXT5 (0.999); SNF1 (0.914); HXT1 (0.856); MIG2 (0.816); RGT1 (0.813); STD1 (0.798); HXK2 (0.705); MIG1 (0.685); YKR075C (0.671); MTH1 (0.637); TRK2 (0.625); HXT4 (0.622); GRR1 (0.618); SUC2 (0.606); TRK1 (0.594); SNF3 (0.585); YLR446W (0.575); PMA1 (0.548); JEN1 (0.482); AGP1 (0.473)

Homologues (species, bitscore): SLC2A8 (Homo sapiens, 166.0); Slc2a2 (Mus musculus, 155.6); slc2a3b (Danio rerio, 171.4); slc2a8 (Xenopus tropicalis, 173.3); Glut1 (Drosophila melanogaster, 157.5); hmit-1.3 (Caenorhabditis elegans, 184.1); STP11 (Arabidopsis thaliana, 213.0)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005298.1:1108790-1110493:- gene-YDR345C_AKU4011 rna-NM_001180653.1_AKU4011 cds-NP_010632.1_AKU4011 96.5 99.9 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000189.1:6308-8011:- gene-YDR345C_BG1 rna-NM_001180653.1_BG1 cds-NP_010632.1_BG1 99.2 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005506.1:1139069-1140772:- gene-YDR345C_Bruggeman rna-NM_001180653.1_Bruggeman cds-NP_010632.1_Bruggeman 99.1 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005522.1:1117922-1119625:- gene-YDR345C_CAT1 rna-NM_001180653.1_CAT1 cds-NP_010632.1_CAT1 99.2 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005362.1:1103506-1105209:- gene-YDR345C_CBS1585 rna-NM_001180653.1_CBS1585 cds-NP_010632.1_CBS1585 96.5 99.9 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005346.1:1122321-1124024:- gene-YDR345C_CBS436 rna-NM_001180653.1_CBS436 cds-NP_010632.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005330.1:1099922-1101625:- gene-YDR345C_CBS6412 rna-NM_001180653.1_CBS6412 cds-NP_010632.1_CBS6412 96.5 99.9 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005314.1:1121661-1123364:- gene-YDR345C_CBS6413 rna-NM_001180653.1_CBS6413 cds-NP_010632.1_CBS6413 96.5 99.9 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001525.1:1161605-1163308:- gene-YDR345C_CENPK1137D rna-NM_001180653.1_CENPK1137D cds-NP_010632.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005474.1:1113551-1115254:- gene-YDR345C_EthanolRed rna-NM_001180653.1_EthanolRed cds-NP_010632.1_EthanolRed 99.0 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005538.1:1116487-1118190:- gene-YDR345C_FaliES1 rna-NM_001180653.1_FaliES1 cds-NP_010632.1_FaliES1 99.0 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000027.1:1-1477:+ gene-YDR345C_JAY291 rna-NM_001180653.1_JAY291 cds-NP_010632.1_JAY291 85.8 86.6 Verified 1 1 0 False False True False False
MUCL30387 GCA_001738515.1 Bread Europe CM005410.1:1122543-1124665:- gene-YDR345C_MUCL30387 rna-NM_001180653.1_MUCL30387 cds-NP_010632.1_MUCL30387 79.6 100.0 Unannotated 1 1 0 False False False True False
MUCL30388 GCA_001738495.1 Bread Europe CM005442.1:1105352-1107055:- gene-YDR345C_MUCL30388 rna-NM_001180653.1_MUCL30388 cds-NP_010632.1_MUCL30388 98.8 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005282.1:1095040-1096743:- gene-YDR345C_MUCL39482 rna-NM_001180653.1_MUCL39482 cds-NP_010632.1_MUCL39482 96.5 99.9 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005426.1:1036927-1038899:- gene-YDR345C_MUCL42920 rna-NM_001180653.1_MUCL42920 cds-NP_010632.1_MUCL42920 85.6 100.0 Unannotated 1 1 0 False False False True False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011813.1:1162880-1164583:- gene-YDR345C_NCIM3186 rna-NM_001180653.1_NCIM3186 cds-NP_010632.1_NCIM3186 97.7 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005266.1:1108580-1110283:- gene-YDR345C_NCYC1407 rna-NM_001180653.1_NCYC1407 cds-NP_010632.1_NCYC1407 96.5 99.9 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994143.1:1114180-1115883:- gene-YDR345C_PE2H3 rna-NM_001180653.1_PE2H3 cds-NP_010632.1_PE2H3 99.2 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999875.1:1119765-1121468:- gene-YDR345C_PE2H4 rna-NM_001180653.1_PE2H4 cds-NP_010632.1_PE2H4 99.2 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001136.10:1162957-1164660:- gene-YDR345C_S288C rna-NM_001180653.1_S288C cds-NP_010632.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000025.1:128402-130105:- gene-YDR345C_SA1 rna-NM_001180653.1_SA1 cds-NP_010632.1_SA1 99.2 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005490.1:1120760-1122463:- gene-YDR345C_ThermosaccDry rna-NM_001180653.1_ThermosaccDry cds-NP_010632.1_ThermosaccDry 99.0 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005458.1:1130575-1132278:- gene-YDR345C_VR1 rna-NM_001180653.1_VR1 cds-NP_010632.1_VR1 99.2 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000008.1:164167-165870:- gene-YDR345C_ZTW1 rna-NM_001180653.1_ZTW1 cds-NP_010632.1_ZTW1 99.4 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047490.1:1115447-1117150:- gene-YDR345C_Sparadoxus rna-NM_001180653.1_Sparadoxus cds-NP_010632.1_Sparadoxus 93.7 100.0 Verified 1 1 1 False True False False False

Additional files