Gene name: HVG1
Reference locus (S288C): YER039C
Gene biotype: protein_coding
Description: Probable GDP-mannose transporter 2; Protein of unknown function; HVG1 has a paralog, VRG4, that arose from the whole genome duplication
Top 10 interactors (score): YER039C-A (0.923); HUT1 (0.904); YMD8 (0.878); YEA4 (0.862); THI74 (0.77); YOL162W (0.753); YOL163W (0.753); DPM1 (0.681); ASF2 (0.65); PAU11 (0.615); DDI3 (0.613); SCS7 (0.611); YIL165C (0.611); LPL1 (0.577); EBS1 (0.571); YHR078W (0.57); COS12 (0.567); GUP2 (0.563); COS10 (0.56); PAU18 (0.558)
Homologues (species, bitscore): GONST1 (Arabidopsis thaliana, 107.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:222515-223264:- | gene-YER039C_AKU4011 | rna-NM_001178930.1_AKU4011 | cds-NP_010956.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000011.1:202452-203201:+ | gene-YER039C_BG1 | rna-NM_001178930.1_BG1 | cds-NP_010956.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:231368-232117:- | gene-YER039C_Bruggeman | rna-NM_001178930.1_Bruggeman | cds-NP_010956.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:225501-226250:- | gene-YER039C_CAT1 | rna-NM_001178930.1_CAT1 | cds-NP_010956.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:222424-223173:- | gene-YER039C_CBS1585 | rna-NM_001178930.1_CBS1585 | cds-NP_010956.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:224369-225118:- | gene-YER039C_CBS436 | rna-NM_001178930.1_CBS436 | cds-NP_010956.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:222285-223034:- | gene-YER039C_CBS6412 | rna-NM_001178930.1_CBS6412 | cds-NP_010956.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:227895-228644:- | gene-YER039C_CBS6413 | rna-NM_001178930.1_CBS6413 | cds-NP_010956.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:226651-227400:- | gene-YER039C_CENPK1137D | rna-NM_001178930.1_CENPK1137D | cds-NP_010956.1_CENPK1137D | 99.3 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:223119-223868:- | gene-YER039C_EthanolRed | rna-NM_001178930.1_EthanolRed | cds-NP_010956.1_EthanolRed | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:223382-224131:- | gene-YER039C_FaliES1 | rna-NM_001178930.1_FaliES1 | cds-NP_010956.1_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000192.1:21146-21895:- | gene-YER039C_JAY291 | rna-NM_001178930.1_JAY291 | cds-NP_010956.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:226815-227564:- | gene-YER039C_MUCL30387 | rna-NM_001178930.1_MUCL30387 | cds-NP_010956.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:223033-223782:- | gene-YER039C_MUCL30388 | rna-NM_001178930.1_MUCL30388 | cds-NP_010956.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:221466-222215:- | gene-YER039C_MUCL39482 | rna-NM_001178930.1_MUCL39482 | cds-NP_010956.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:228542-229291:- | gene-YER039C_MUCL42920 | rna-NM_001178930.1_MUCL42920 | cds-NP_010956.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:228455-229204:- | gene-YER039C_NCIM3186 | rna-NM_001178930.1_NCIM3186 | cds-NP_010956.1_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:226528-227277:- | gene-YER039C_NCYC1407 | rna-NM_001178930.1_NCYC1407 | cds-NP_010956.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:237157-237906:- | gene-YER039C_PE2H3 | rna-NM_001178930.1_PE2H3 | cds-NP_010956.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:227098-227847:- | gene-YER039C_PE2H4 | rna-NM_001178930.1_PE2H4 | cds-NP_010956.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:228456-229205:- | gene-YER039C_S288C | rna-NM_001178930.1_S288C | cds-NP_010956.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000020.1:14481-15230:+ | gene-YER039C_SA1 | rna-NM_001178930.1_SA1 | cds-NP_010956.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:224154-224903:- | gene-YER039C_ThermosaccDry | rna-NM_001178930.1_ThermosaccDry | cds-NP_010956.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:223253-224002:- | gene-YER039C_VR1 | rna-NM_001178930.1_VR1 | cds-NP_010956.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000009.1:221367-222116:- | gene-YER039C_ZTW1 | rna-NM_001178930.1_ZTW1 | cds-NP_010956.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:225181-225929:- | gene-YER039C_Sparadoxus | rna-NM_001178930.1_Sparadoxus | cds-NP_010956.1_Sparadoxus | 88.9 | 99.8 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |