HSX1 (YNCJ0025W)

Gene profile

Gene name: HSX1
Reference locus (S288C): YNCJ0025W
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005304.1:509906-509977:+ gene-YNCJ0025W_AKU4011 rna-YNCJ0025W_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000190.1:103014-103085:- gene-YNCJ0025W_BG1 rna-YNCJ0025W_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005512.1:523955-524026:+ gene-YNCJ0025W_Bruggeman rna-YNCJ0025W_Bruggeman Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005528.1:528121-528192:+ gene-YNCJ0025W_CAT1 rna-YNCJ0025W_CAT1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005368.1:521975-522046:+ gene-YNCJ0025W_CBS1585 rna-YNCJ0025W_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005352.1:540684-540755:+ gene-YNCJ0025W_CBS436 rna-YNCJ0025W_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005336.1:509690-509761:+ gene-YNCJ0025W_CBS6412 rna-YNCJ0025W_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005320.1:511934-512005:+ gene-YNCJ0025W_CBS6413 rna-YNCJ0025W_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001531.1:520582-520653:+ gene-YNCJ0025W_CENPK1137D rna-YNCJ0025W_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005480.1:514818-514889:+ gene-YNCJ0025W_EthanolRed rna-YNCJ0025W_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005544.1:526035-526106:+ gene-YNCJ0025W_2_FaliES1 Unknown Unknown 100.0 100.0 Unannotated 3 3 0 Unknown Unknown non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia MBWD01000034.1:139-210:- gene-YNCJ0025W_1_FaliES1 Unknown Unknown 100.0 100.0 Unannotated 3 2 0 Unknown Unknown non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005544.1:526284-526355:+ gene-YNCJ0025W_FaliES1 rna-YNCJ0025W_FaliES1 Unknown 100.0 100.0 Unannotated 3 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000352.1:2316-2387:- gene-YNCJ0025W_JAY291 rna-YNCJ0025W_JAY291 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005416.1:524492-524563:+ gene-YNCJ0025W_MUCL30387 rna-YNCJ0025W_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005448.1:521767-521838:+ gene-YNCJ0025W_MUCL30388 rna-YNCJ0025W_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005288.1:515433-515504:+ gene-YNCJ0025W_MUCL39482 rna-YNCJ0025W_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005432.1:520203-520274:+ gene-YNCJ0025W_MUCL42920 rna-YNCJ0025W_MUCL42920 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011819.1:538534-538605:+ gene-YNCJ0025W_NCIM3186 rna-YNCJ0025W_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005272.1:513289-513360:+ gene-YNCJ0025W_NCYC1407 rna-YNCJ0025W_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994149.1:531186-531257:+ gene-YNCJ0025W_PE2H3 rna-YNCJ0025W_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999881.1:524882-524953:+ gene-YNCJ0025W_PE2H4 rna-YNCJ0025W_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001142.9:538555-538626:+ gene-YNCJ0025W_S288C rna-YNCJ0025W_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000110.1:19785-19856:+ gene-YNCJ0025W_SA1 rna-YNCJ0025W_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia MBWA01000118.1:485-556:+ gene-YNCJ0025W_1_ThermosaccDry Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005496.1:520214-520285:+ gene-YNCJ0025W_ThermosaccDry rna-YNCJ0025W_ThermosaccDry Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005464.1:522219-522290:+ gene-YNCJ0025W_VR1 rna-YNCJ0025W_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000021.1:499606-499677:+ gene-YNCJ0025W_ZTW1 rna-YNCJ0025W_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047496.1:531815-531886:+ gene-YNCJ0025W_Sparadoxus rna-YNCJ0025W_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files