Gene name: HSP60
Reference locus (S288C): YLR259C
Gene biotype: protein_coding
Description: Heat shock protein 60, mitochondrial; Tetradecameric mitochondrial chaperonin; required for ATP-dependent folding of precursor polypeptides and complex assembly; prevents aggregation and mediates protein refolding after heat shock; role in mtDNA transmission; phosphorylated
Top 10 interactors (score): HSP10 (0.999); SSC1 (0.999); HSC82 (0.998); HSP82 (0.998); KAR2 (0.996); ECM10 (0.995); TOM40 (0.991); ATP2 (0.99); MGE1 (0.986); ISC1 (0.978); STI1 (0.972); MAS2 (0.971); RSE1 (0.971); PIM1 (0.969); ACO1 (0.968); PRP9 (0.968); ATP1 (0.967); PRP43 (0.967); SMD2 (0.965); SMX3 (0.965)
Homologues (species, bitscore): HSPD1 (Homo sapiens, 607.1); Hspd1 (Mus musculus, 609.8); hspd1 (Danio rerio, 625.2); hspd1 (Xenopus tropicalis, 604.7); Hsp60 (Drosophila melanogaster, 634.0); hsp-60 (Caenorhabditis elegans, 623.6); HSP60 (Arabidopsis thaliana, 662.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:611572-613290:- | gene-YLR259C_AKU4011 | rna-NM_001182146.1_AKU4011 | cds-NP_013360.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000170.1:118600-120318:+ | gene-YLR259C_BG1 | rna-NM_001182146.1_BG1 | cds-NP_013360.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:645818-647536:- | gene-YLR259C_Bruggeman | rna-NM_001182146.1_Bruggeman | cds-NP_013360.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:644963-646681:- | gene-YLR259C_CAT1 | rna-NM_001182146.1_CAT1 | cds-NP_013360.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:647067-648785:- | gene-YLR259C_CBS1585 | rna-NM_001182146.1_CBS1585 | cds-NP_013360.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:631292-633010:- | gene-YLR259C_CBS436 | rna-NM_001182146.1_CBS436 | cds-NP_013360.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:610042-611760:- | gene-YLR259C_CBS6412 | rna-NM_001182146.1_CBS6412 | cds-NP_013360.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:647363-649081:- | gene-YLR259C_CBS6413 | rna-NM_001182146.1_CBS6413 | cds-NP_013360.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:647893-649611:- | gene-YLR259C_CENPK1137D | rna-NM_001182146.1_CENPK1137D | cds-NP_013360.1_CENPK1137D | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:605674-607392:- | gene-YLR259C_EthanolRed | rna-NM_001182146.1_EthanolRed | cds-NP_013360.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:634511-636229:- | gene-YLR259C_FaliES1 | rna-NM_001182146.1_FaliES1 | cds-NP_013360.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000136.1:23124-24842:+ | gene-YLR259C_JAY291 | rna-NM_001182146.1_JAY291 | cds-NP_013360.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:646678-648396:- | gene-YLR259C_MUCL30387 | rna-NM_001182146.1_MUCL30387 | cds-NP_013360.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:651441-653159:- | gene-YLR259C_MUCL30388 | rna-NM_001182146.1_MUCL30388 | cds-NP_013360.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:648048-649766:- | gene-YLR259C_MUCL39482 | rna-NM_001182146.1_MUCL39482 | cds-NP_013360.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:642820-644538:- | gene-YLR259C_MUCL42920 | rna-NM_001182146.1_MUCL42920 | cds-NP_013360.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:663258-664976:- | gene-YLR259C_NCIM3186 | rna-NM_001182146.1_NCIM3186 | cds-NP_013360.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:635035-636753:- | gene-YLR259C_NCYC1407 | rna-NM_001182146.1_NCYC1407 | cds-NP_013360.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:638769-640487:- | gene-YLR259C_PE2H3 | rna-NM_001182146.1_PE2H3 | cds-NP_013360.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:638513-640231:- | gene-YLR259C_PE2H4 | rna-NM_001182146.1_PE2H4 | cds-NP_013360.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:663284-665002:- | gene-YLR259C_S288C | rna-NM_001182146.1_S288C | cds-NP_013360.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000013.1:23370-25088:+ | gene-YLR259C_SA1 | rna-NM_001182146.1_SA1 | cds-NP_013360.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:636519-638237:- | gene-YLR259C_ThermosaccDry | rna-NM_001182146.1_ThermosaccDry | cds-NP_013360.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:647883-649601:- | gene-YLR259C_VR1 | rna-NM_001182146.1_VR1 | cds-NP_013360.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000024.1:160831-162549:- | gene-YLR259C_ZTW1 | rna-NM_001182146.1_ZTW1 | cds-NP_013360.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:622371-624089:- | gene-YLR259C_Sparadoxus | rna-NM_001182146.1_Sparadoxus | cds-NP_013360.1_Sparadoxus | 92.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |