Gene name: HSP30
Reference locus (S288C): YCR021C
Gene biotype: protein_coding
Description: 30 kDa heat shock protein; Negative regulator of the H(+)-ATPase Pma1p; stress-responsive protein; hydrophobic plasma membrane localized; induced by heat shock, ethanol treatment, weak organic acid, glucose limitation, and entry into stationary phase; Belongs to the archaeal/bacterial/fungal opsin family
Top 10 interactors (score): YHC3 (0.904); RHB1 (0.902); ALP1 (0.902); HSP26 (0.866); HSP42 (0.85); HSP78 (0.836); BTN2 (0.831); HSP104 (0.818); CAN1 (0.787); HSP12 (0.774); TPO2 (0.768); HSP10 (0.767); PMA1 (0.763); HSP82 (0.714); SSA3 (0.711); CTT1 (0.696); YLR297W (0.683); MSN2 (0.68); SSA4 (0.659); HXT5 (0.647)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005297.1:150593-151591:- | gene-YCR021C_AKU4011 | rna-NM_001178735.1_AKU4011 | cds-NP_009950.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000067.1:4749-5747:- | gene-YCR021C_BG1 | rna-NM_001178735.1_BG1 | cds-NP_009950.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005505.1:145915-146913:- | gene-YCR021C_Bruggeman | rna-NM_001178735.1_Bruggeman | cds-NP_009950.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:157485-158483:- | gene-YCR021C_CAT1 | rna-NM_001178735.1_CAT1 | cds-NP_009950.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005361.1:145354-146352:- | gene-YCR021C_CBS1585 | rna-NM_001178735.1_CBS1585 | cds-NP_009950.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:156496-157494:- | gene-YCR021C_CBS436 | rna-NM_001178735.1_CBS436 | cds-NP_009950.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005329.1:139207-140205:- | gene-YCR021C_CBS6412 | rna-NM_001178735.1_CBS6412 | cds-NP_009950.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005313.1:151531-152529:- | gene-YCR021C_CBS6413 | rna-NM_001178735.1_CBS6413 | cds-NP_009950.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001524.1:155592-156590:- | gene-YCR021C_CENPK1137D | rna-NM_001178735.1_CENPK1137D | cds-NP_009950.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005473.1:148601-149599:- | gene-YCR021C_EthanolRed | rna-NM_001178735.1_EthanolRed | cds-NP_009950.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:151462-152460:- | gene-YCR021C_FaliES1 | rna-NM_001178735.1_FaliES1 | cds-NP_009950.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000371.1:11311-12309:+ | gene-YCR021C_JAY291 | rna-NM_001178735.1_JAY291 | cds-NP_009950.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005409.1:143094-144092:- | gene-YCR021C_MUCL30387 | rna-NM_001178735.1_MUCL30387 | cds-NP_009950.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005441.1:143362-144360:- | gene-YCR021C_MUCL30388 | rna-NM_001178735.1_MUCL30388 | cds-NP_009950.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:151678-152676:- | gene-YCR021C_MUCL39482 | rna-NM_001178735.1_MUCL39482 | cds-NP_009950.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005425.1:148074-149072:- | gene-YCR021C_MUCL42920 | rna-NM_001178735.1_MUCL42920 | cds-NP_009950.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011812.1:155741-156739:- | gene-YCR021C_NCIM3186 | rna-NM_001178735.1_NCIM3186 | cds-NP_009950.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005265.1:153442-154440:- | gene-YCR021C_NCYC1407 | rna-NM_001178735.1_NCYC1407 | cds-NP_009950.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:162148-163146:- | gene-YCR021C_PE2H3 | rna-NM_001178735.1_PE2H3 | cds-NP_009950.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:156769-157767:- | gene-YCR021C_PE2H4 | rna-NM_001178735.1_PE2H4 | cds-NP_009950.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:156109-157107:- | gene-YCR021C_S288C | rna-NM_001178735.1_S288C | cds-NP_009950.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000083.1:4640-5638:- | gene-YCR021C_SA1 | rna-NM_001178735.1_SA1 | cds-NP_009950.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005489.1:151533-152531:- | gene-YCR021C_ThermosaccDry | rna-NM_001178735.1_ThermosaccDry | cds-NP_009950.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:162300-163298:- | gene-YCR021C_VR1 | rna-NM_001178735.1_VR1 | cds-NP_009950.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:150467-151465:- | gene-YCR021C_ZTW1 | rna-NM_001178735.1_ZTW1 | cds-NP_009950.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047489.1:183716-184714:- | gene-YCR021C_Sparadoxus | rna-NM_001178735.1_Sparadoxus | cds-NP_009950.1_Sparadoxus | 90.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |