Gene name: HSK3
Reference locus (S288C): YKL138C-A
Gene biotype: protein_coding
Description: Essential subunit of the Dam1 complex (aka DASH complex); complex couples kinetochores to the force produced by MT depolymerization thereby aiding in chromosome segregation; is transferred to the kinetochore prior to mitosis
Top 10 interactors (score): SPC34 (0.997); ASK1 (0.996); DAD4 (0.995); DAD2 (0.993); SPC19 (0.991); DAD3 (0.99); DAD1 (0.987); DUO1 (0.984); DAM1 (0.982); IML3 (0.904); CHL4 (0.9); YJL127C-B (0.767); DSN1 (0.757); YIL156W-B (0.754); CMC4 (0.744); ERI1 (0.71); O0508 (0.699); YJL009W (0.698); SPC3 (0.679); YSF3 (0.678)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:171700-171909:- | gene-YKL138C-A_AKU4011 | rna-NM_001184513.1_AKU4011 | cds-NP_690844.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000030.1:148863-149072:- | gene-YKL138C-A_BG1 | rna-NM_001184513.1_BG1 | cds-NP_690844.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:189362-189571:- | gene-YKL138C-A_Bruggeman | rna-NM_001184513.1_Bruggeman | cds-NP_690844.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:184684-184893:- | gene-YKL138C-A_CAT1 | rna-NM_001184513.1_CAT1 | cds-NP_690844.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:183952-184161:- | gene-YKL138C-A_CBS1585 | rna-NM_001184513.1_CBS1585 | cds-NP_690844.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:182540-182749:- | gene-YKL138C-A_CBS436 | rna-NM_001184513.1_CBS436 | cds-NP_690844.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:168574-168783:- | gene-YKL138C-A_CBS6412 | rna-NM_001184513.1_CBS6412 | cds-NP_690844.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:184397-184606:- | gene-YKL138C-A_CBS6413 | rna-NM_001184513.1_CBS6413 | cds-NP_690844.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:184447-184656:- | gene-YKL138C-A_CENPK1137D | rna-NM_001184513.1_CENPK1137D | cds-NP_690844.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:182432-182641:- | gene-YKL138C-A_EthanolRed | rna-NM_001184513.1_EthanolRed | cds-NP_690844.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:183244-183453:- | gene-YKL138C-A_FaliES1 | rna-NM_001184513.1_FaliES1 | cds-NP_690844.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000357.1:5574-5783:- | gene-YKL138C-A_JAY291 | rna-NM_001184513.1_JAY291 | cds-NP_690844.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:191463-191672:- | gene-YKL138C-A_MUCL30387 | rna-NM_001184513.1_MUCL30387 | cds-NP_690844.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:185815-186024:- | gene-YKL138C-A_MUCL30388 | rna-NM_001184513.1_MUCL30388 | cds-NP_690844.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:183730-183939:- | gene-YKL138C-A_MUCL39482 | rna-NM_001184513.1_MUCL39482 | cds-NP_690844.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:188123-188332:- | gene-YKL138C-A_MUCL42920 | rna-NM_001184513.1_MUCL42920 | cds-NP_690844.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:184792-185001:- | gene-YKL138C-A_NCIM3186 | rna-NM_001184513.1_NCIM3186 | cds-NP_690844.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:183920-184129:- | gene-YKL138C-A_NCYC1407 | rna-NM_001184513.1_NCYC1407 | cds-NP_690844.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:191042-191251:- | gene-YKL138C-A_PE2H3 | rna-NM_001184513.1_PE2H3 | cds-NP_690844.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:187330-187539:- | gene-YKL138C-A_PE2H4 | rna-NM_001184513.1_PE2H4 | cds-NP_690844.1_PE2H4 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:184803-185012:- | gene-YKL138C-A_S288C | rna-NM_001184513.1_S288C | cds-NP_690844.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000008.1:101271-101480:- | gene-YKL138C-A_SA1 | rna-NM_001184513.1_SA1 | cds-NP_690844.1_SA1 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:183944-184153:- | gene-YKL138C-A_ThermosaccDry | rna-NM_001184513.1_ThermosaccDry | cds-NP_690844.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:183300-183509:- | gene-YKL138C-A_VR1 | rna-NM_001184513.1_VR1 | cds-NP_690844.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:182479-182688:- | gene-YKL138C-A_ZTW1 | rna-NM_001184513.1_ZTW1 | cds-NP_690844.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:199181-199390:- | gene-YKL138C-A_Sparadoxus | rna-NM_001184513.1_Sparadoxus | cds-NP_690844.1_Sparadoxus | 89.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |