HRA1 (YNCA0001W)

Gene profile

Gene name: HRA1
Reference locus (S288C): YNCA0001W
Gene biotype: ncRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005295.1:84431-84994:+ gene-YNCA0001W_AKU4011 rna-NR_132149.1_AKU4011 Unknown 98.9 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000070.1:71558-72121:+ gene-YNCA0001W_BG1 rna-NR_132149.1_BG1 Unknown 99.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005503.1:99310-99873:+ gene-YNCA0001W_Bruggeman rna-NR_132149.1_Bruggeman Unknown 99.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005519.1:85657-86220:+ gene-YNCA0001W_CAT1 rna-NR_132149.1_CAT1 Unknown 99.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005359.1:97449-98012:+ gene-YNCA0001W_CBS1585 rna-NR_132149.1_CBS1585 Unknown 98.9 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005343.1:97697-98260:+ gene-YNCA0001W_CBS436 rna-NR_132149.1_CBS436 Unknown 99.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005327.1:83594-84157:+ gene-YNCA0001W_CBS6412 rna-NR_132149.1_CBS6412 Unknown 98.9 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005311.1:95713-96276:+ gene-YNCA0001W_CBS6413 rna-NR_132149.1_CBS6413 Unknown 98.9 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001522.1:99395-99958:+ gene-YNCA0001W_CENPK1137D rna-NR_132149.1_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005471.1:85853-86416:+ gene-YNCA0001W_EthanolRed rna-NR_132149.1_EthanolRed Unknown 98.9 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005535.1:100476-101039:+ gene-YNCA0001W_FaliES1 rna-NR_132149.1_FaliES1 Unknown 98.9 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000084.1:71747-72310:+ gene-YNCA0001W_JAY291 rna-NR_132149.1_JAY291 Unknown 99.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005407.1:100402-100965:+ gene-YNCA0001W_MUCL30387 rna-NR_132149.1_MUCL30387 Unknown 99.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005439.1:96949-97512:+ gene-YNCA0001W_MUCL30388 rna-NR_132149.1_MUCL30388 Unknown 99.1 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005279.1:96235-96798:+ gene-YNCA0001W_MUCL39482 rna-NR_132149.1_MUCL39482 Unknown 98.9 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005423.1:98606-99169:+ gene-YNCA0001W_MUCL42920 rna-NR_132149.1_MUCL42920 Unknown 99.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011810.1:99182-99745:+ gene-YNCA0001W_NCIM3186 rna-NR_132149.1_NCIM3186 Unknown 98.9 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005263.1:84113-84676:+ gene-YNCA0001W_NCYC1407 rna-NR_132149.1_NCYC1407 Unknown 98.9 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994140.1:86023-86586:+ gene-YNCA0001W_PE2H3 rna-NR_132149.1_PE2H3 Unknown 99.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999872.1:85742-86305:+ gene-YNCA0001W_PE2H4 rna-NR_132149.1_PE2H4 Unknown 99.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001133.9:99305-99868:+ gene-YNCA0001W_S288C rna-NR_132149.1_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000059.1:28428-28991:+ gene-YNCA0001W_SA1 rna-NR_132149.1_SA1 Unknown 99.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005487.1:99994-100557:+ gene-YNCA0001W_ThermosaccDry rna-NR_132149.1_ThermosaccDry Unknown 98.7 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005455.1:101273-101836:+ gene-YNCA0001W_VR1 rna-NR_132149.1_VR1 Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000002.1:71809-72372:+ gene-YNCA0001W_ZTW1 rna-NR_132149.1_ZTW1 Unknown 98.9 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047487.1:89442-90004:+ gene-YNCA0001W_Sparadoxus rna-NR_132149.1_Sparadoxus Unknown 89.1 99.8 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files