Gene name: HPC2
Reference locus (S288C): YBR215W
Gene biotype: protein_coding
Description: Histone promoter control protein 2; Subunit of the HIR complex; HIR is a nucleosome assembly complex involved in regulation of histone gene transcription; mutants display synthetic defects with subunits of FACT, a complex that allows passage of RNA Pol II through nucleosomes
Top 10 interactors (score): HIR3 (0.999); HIR1 (0.999); HIR2 (0.999); ASF1 (0.993); RLF2 (0.927); CAC2 (0.913); RTT106 (0.904); SPT10 (0.738); HHT2 (0.712); HHT1 (0.69); MSI1 (0.63); HTB1 (0.612); HTA1 (0.584); YML6 (0.563); GPI15 (0.561); SPT2 (0.526); ISW1 (0.525); HHF1 (0.523); RTT109 (0.495); SNF2 (0.469)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:637658-639619:+ | gene-YBR215W_AKU4011 | rna-NM_001178563.3_AKU4011 | cds-NP_009774.4_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000066.1:8581-10542:+ | gene-YBR215W_BG1 | rna-NM_001178563.3_BG1 | cds-NP_009774.4_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:638815-640776:+ | gene-YBR215W_Bruggeman | rna-NM_001178563.3_Bruggeman | cds-NP_009774.4_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:642019-643980:+ | gene-YBR215W_CAT1 | rna-NM_001178563.3_CAT1 | cds-NP_009774.4_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:629190-631151:+ | gene-YBR215W_CBS1585 | rna-NM_001178563.3_CBS1585 | cds-NP_009774.4_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:635618-637579:+ | gene-YBR215W_CBS436 | rna-NM_001178563.3_CBS436 | cds-NP_009774.4_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:724167-726128:+ | gene-YBR215W_CBS6412 | rna-NM_001178563.3_CBS6412 | cds-NP_009774.4_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:635228-637189:+ | gene-YBR215W_CBS6413 | rna-NM_001178563.3_CBS6413 | cds-NP_009774.4_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:647103-649064:+ | gene-YBR215W_CENPK1137D | rna-NM_001178563.3_CENPK1137D | cds-NP_009774.4_CENPK1137D | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:760903-762864:+ | gene-YBR215W_EthanolRed | rna-NM_001178563.3_EthanolRed | cds-NP_009774.4_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:654010-655971:+ | gene-YBR215W_FaliES1 | rna-NM_001178563.3_FaliES1 | cds-NP_009774.4_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000326.1:8385-10346:+ | gene-YBR215W_JAY291 | rna-NM_001178563.3_JAY291 | cds-NP_009774.4_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:640828-642789:+ | gene-YBR215W_MUCL30387 | rna-NM_001178563.3_MUCL30387 | cds-NP_009774.4_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:657908-659869:+ | gene-YBR215W_MUCL30388 | rna-NM_001178563.3_MUCL30388 | cds-NP_009774.4_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:627542-629503:+ | gene-YBR215W_MUCL39482 | rna-NM_001178563.3_MUCL39482 | cds-NP_009774.4_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:637026-638987:+ | gene-YBR215W_MUCL42920 | rna-NM_001178563.3_MUCL42920 | cds-NP_009774.4_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:653153-655114:+ | gene-YBR215W_NCIM3186 | rna-NM_001178563.3_NCIM3186 | cds-NP_009774.4_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:629404-631365:+ | gene-YBR215W_NCYC1407 | rna-NM_001178563.3_NCYC1407 | cds-NP_009774.4_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:652523-654484:+ | gene-YBR215W_PE2H3 | rna-NM_001178563.3_PE2H3 | cds-NP_009774.4_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:650199-652160:+ | gene-YBR215W_PE2H4 | rna-NM_001178563.3_PE2H4 | cds-NP_009774.4_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:653356-655317:+ | gene-YBR215W_S288C | rna-NM_001178563.3_S288C | cds-NP_009774.4_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000019.1:8478-10439:+ | gene-YBR215W_SA1 | rna-NM_001178563.3_SA1 | cds-NP_009774.4_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:653020-654981:+ | gene-YBR215W_ThermosaccDry | rna-NM_001178563.3_ThermosaccDry | cds-NP_009774.4_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:633194-635155:+ | gene-YBR215W_VR1 | rna-NM_001178563.3_VR1 | cds-NP_009774.4_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:625887-627848:+ | gene-YBR215W_ZTW1 | rna-NM_001178563.3_ZTW1 | cds-NP_009774.4_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:669853-671816:+ | gene-YBR215W_Sparadoxus | rna-NM_001178563.3_Sparadoxus | cds-NP_009774.4_Sparadoxus | 86.5 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |