HOT13 (YKL084W)


Gene profile

Gene name: HOT13
Reference locus (S288C): YKL084W
Gene biotype: protein_coding

Description: Helper of Tim protein 13; Zinc-binding mitochondrial intermembrane space (IMS) protein; involved in a disulfide relay system for IMS import of cysteine-containing proteins; binds Mia40p and stimulates its Erv1p-dependent oxidation, probably by sequestering zinc

Top 10 interactors (score): MIA40 (0.958); ERV1 (0.896); TIM17 (0.828); TIM13 (0.825); TIM8 (0.769); TIM12 (0.747); TIM10 (0.746); ERV2 (0.723); OCT1 (0.72); TIM9 (0.717); ZIM17 (0.705); TIM54 (0.672); AFG3 (0.671); TOM40 (0.661); YME1 (0.661); SAM35 (0.661); TIM18 (0.654); SAM50 (0.65); CYM1 (0.647); TIM44 (0.625)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005305.1:267076-267426:+ gene-YKL084W_AKU4011 rna-NM_001179650.1_AKU4011 cds-NP_012839.1_AKU4011 99.1 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000030.1:244247-244597:+ gene-YKL084W_BG1 rna-NM_001179650.1_BG1 cds-NP_012839.1_BG1 99.7 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005513.1:285244-285594:+ gene-YKL084W_Bruggeman rna-NM_001179650.1_Bruggeman cds-NP_012839.1_Bruggeman 99.1 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005529.1:280037-280387:+ gene-YKL084W_CAT1 rna-NM_001179650.1_CAT1 cds-NP_012839.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005369.1:279317-279667:+ gene-YKL084W_CBS1585 rna-NM_001179650.1_CBS1585 cds-NP_012839.1_CBS1585 99.4 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005353.1:277903-278253:+ gene-YKL084W_CBS436 rna-NM_001179650.1_CBS436 cds-NP_012839.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005337.1:263943-264293:+ gene-YKL084W_CBS6412 rna-NM_001179650.1_CBS6412 cds-NP_012839.1_CBS6412 99.4 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005321.1:279771-280121:+ gene-YKL084W_CBS6413 rna-NM_001179650.1_CBS6413 cds-NP_012839.1_CBS6413 99.4 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001532.1:280151-280501:+ gene-YKL084W_CENPK1137D rna-NM_001179650.1_CENPK1137D cds-NP_012839.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005481.1:277769-278119:+ gene-YKL084W_EthanolRed rna-NM_001179650.1_EthanolRed cds-NP_012839.1_EthanolRed 98.8 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005545.1:278581-278931:+ gene-YKL084W_FaliES1 rna-NM_001179650.1_FaliES1 cds-NP_012839.1_FaliES1 98.8 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000357.1:100900-101249:+ gene-YKL084W_JAY291 rna-NM_001179650.1_JAY291 cds-NP_012839.1_JAY291 99.7 99.7 Verified 1 1 0 False False False True False
MUCL30387 GCA_001738515.1 Bread Europe CM005417.1:287043-287393:+ gene-YKL084W_MUCL30387 rna-NM_001179650.1_MUCL30387 cds-NP_012839.1_MUCL30387 99.1 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005449.1:281439-281789:+ gene-YKL084W_MUCL30388 rna-NM_001179650.1_MUCL30388 cds-NP_012839.1_MUCL30388 99.1 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005289.1:279102-279452:+ gene-YKL084W_MUCL39482 rna-NM_001179650.1_MUCL39482 cds-NP_012839.1_MUCL39482 99.4 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005433.1:283727-284077:+ gene-YKL084W_MUCL42920 rna-NM_001179650.1_MUCL42920 cds-NP_012839.1_MUCL42920 100.0 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011820.1:280498-280848:+ gene-YKL084W_NCIM3186 rna-NM_001179650.1_NCIM3186 cds-NP_012839.1_NCIM3186 99.1 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005273.1:279296-279646:+ gene-YKL084W_NCYC1407 rna-NM_001179650.1_NCYC1407 cds-NP_012839.1_NCYC1407 99.4 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994150.1:286381-286731:+ gene-YKL084W_PE2H3 rna-NM_001179650.1_PE2H3 cds-NP_012839.1_PE2H3 99.7 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999882.1:282668-283018:+ gene-YKL084W_PE2H4 rna-NM_001179650.1_PE2H4 cds-NP_012839.1_PE2H4 99.7 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001143.9:280509-280859:+ gene-YKL084W_S288C rna-NM_001179650.1_S288C cds-NP_012839.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000008.1:196639-196989:+ gene-YKL084W_SA1 rna-NM_001179650.1_SA1 cds-NP_012839.1_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005497.1:279286-279636:+ gene-YKL084W_ThermosaccDry rna-NM_001179650.1_ThermosaccDry cds-NP_012839.1_ThermosaccDry 99.1 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005465.1:278643-278993:+ gene-YKL084W_VR1 rna-NM_001179650.1_VR1 cds-NP_012839.1_VR1 99.7 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000022.1:277837-278187:+ gene-YKL084W_ZTW1 rna-NM_001179650.1_ZTW1 cds-NP_012839.1_ZTW1 100.0 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047497.1:294945-295295:+ gene-YKL084W_Sparadoxus rna-NM_001179650.1_Sparadoxus cds-NP_012839.1_Sparadoxus 87.4 100.0 Verified 1 1 1 False True False False False

Additional files