Gene name: HOP2
Reference locus (S288C): YGL033W
Gene biotype: protein_coding
Description: 26S proteasome regulatory subunit, ATPase 3, interacting protein; Homologous-pairing protein 2; Meiosis-specific protein that localizes to chromosomes; prevents synapsis between nonhomologous chromosomes and ensures synapsis between homologs; complexes with Mnd1p to promote homolog pairing and meiotic double-strand break repair; heterodimer of Hop2p-Mnd1p stimulates the Dmc1p-mediated strand invasion
Top 10 interactors (score): MND1 (0.999); DMC1 (0.987); SPO11 (0.948); MEK1 (0.921); HOP1 (0.891); SAE2 (0.85); RED1 (0.836); RAD51 (0.823); MSH4 (0.815); PCH2 (0.796); ZIP2 (0.79); ZIP1 (0.784); YMR147W (0.753); REC8 (0.699); YHR202W (0.69); NDT80 (0.684); SPO22 (0.665); PHO92 (0.656); HFM1 (0.652); MET2 (0.642)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:437677-438453:+ | gene-YGL033W_AKU4011 | rna-NM_001180898.2_AKU4011 | cds-NP_011482.3_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000060.1:137679-138455:- | gene-YGL033W_BG1 | rna-NM_001180898.2_BG1 | cds-NP_011482.3_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:438441-439217:+ | gene-YGL033W_Bruggeman | rna-NM_001180898.2_Bruggeman | cds-NP_011482.3_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:436684-437460:+ | gene-YGL033W_CAT1 | rna-NM_001180898.2_CAT1 | cds-NP_011482.3_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:439149-439925:+ | gene-YGL033W_CBS1585 | rna-NM_001180898.2_CBS1585 | cds-NP_011482.3_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:433546-434322:+ | gene-YGL033W_CBS436 | rna-NM_001180898.2_CBS436 | cds-NP_011482.3_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:431752-432528:+ | gene-YGL033W_CBS6412 | rna-NM_001180898.2_CBS6412 | cds-NP_011482.3_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:435818-436594:+ | gene-YGL033W_CBS6413 | rna-NM_001180898.2_CBS6413 | cds-NP_011482.3_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:435464-436240:+ | gene-YGL033W_CENPK1137D | rna-NM_001180898.2_CENPK1137D | cds-NP_011482.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:426020-426796:+ | gene-YGL033W_EthanolRed | rna-NM_001180898.2_EthanolRed | cds-NP_011482.3_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:429258-430034:+ | gene-YGL033W_FaliES1 | rna-NM_001180898.2_FaliES1 | cds-NP_011482.3_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000234.1:1230-2006:- | gene-YGL033W_JAY291 | rna-NM_001180898.2_JAY291 | cds-NP_011482.3_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:435646-436422:+ | gene-YGL033W_MUCL30387 | rna-NM_001180898.2_MUCL30387 | cds-NP_011482.3_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:438444-439220:+ | gene-YGL033W_MUCL30388 | rna-NM_001180898.2_MUCL30388 | cds-NP_011482.3_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:434987-435763:+ | gene-YGL033W_MUCL39482 | rna-NM_001180898.2_MUCL39482 | cds-NP_011482.3_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:444444-445220:+ | gene-YGL033W_MUCL42920 | rna-NM_001180898.2_MUCL42920 | cds-NP_011482.3_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:435625-436401:+ | gene-YGL033W_NCIM3186 | rna-NM_001180898.2_NCIM3186 | cds-NP_011482.3_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:428996-429772:+ | gene-YGL033W_NCYC1407 | rna-NM_001180898.2_NCYC1407 | cds-NP_011482.3_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:431659-432435:+ | gene-YGL033W_PE2H3 | rna-NM_001180898.2_PE2H3 | cds-NP_011482.3_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:436709-437485:+ | gene-YGL033W_PE2H4 | rna-NM_001180898.2_PE2H4 | cds-NP_011482.3_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:435625-436401:+ | gene-YGL033W_S288C | rna-NM_001180898.2_S288C | cds-NP_011482.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000021.1:119197-119973:- | gene-YGL033W_SA1 | rna-NM_001180898.2_SA1 | cds-NP_011482.3_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:448624-449400:+ | gene-YGL033W_ThermosaccDry | rna-NM_001180898.2_ThermosaccDry | cds-NP_011482.3_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:538698-539474:+ | gene-YGL033W_VR1 | rna-NM_001180898.2_VR1 | cds-NP_011482.3_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:427220-427996:+ | gene-YGL033W_ZTW1 | rna-NM_001180898.2_ZTW1 | cds-NP_011482.3_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:436379-437158:+ | gene-YGL033W_Sparadoxus | rna-NM_001180898.2_Sparadoxus | cds-NP_011482.3_Sparadoxus | 89.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |