Gene name: HOM2
Reference locus (S288C): YDR158W
Gene biotype: protein_coding
Description: Aspartic beta semi-aldehyde dehydrogenase; catalyzes the second step in the common pathway for methionine and threonine biosynthesis; expression regulated by Gcn4p and the general control of amino acid synthesis; Belongs to the aspartate-semialdehyde dehydrogenase family
Top 10 interactors (score): HOM6 (0.999); HOM3 (0.999); THR1 (0.997); THR4 (0.997); ILV6 (0.944); ARO2 (0.919); ILV3 (0.917); ARO1 (0.908); ARG1 (0.888); TRP5 (0.884); MET2 (0.854); GLY1 (0.83); ILV5 (0.83); ARG5,6 (0.824); ILV1 (0.821); HIS4 (0.81); BAT1 (0.803); LEU4 (0.799); BAT2 (0.798); PGK1 (0.79)
Homologues (species, bitscore): AT1G14810 (Arabidopsis thaliana, 88.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:741678-742775:+ | gene-YDR158W_AKU4011 | rna-NM_001180465.3_AKU4011 | cds-NP_010442.3_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:383979-385076:- | gene-YDR158W_BG1 | rna-NM_001180465.3_BG1 | cds-NP_010442.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:773176-774273:+ | gene-YDR158W_Bruggeman | rna-NM_001180465.3_Bruggeman | cds-NP_010442.3_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:760463-761560:+ | gene-YDR158W_CAT1 | rna-NM_001180465.3_CAT1 | cds-NP_010442.3_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:732046-733143:+ | gene-YDR158W_CBS1585 | rna-NM_001180465.3_CBS1585 | cds-NP_010442.3_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:758216-759313:+ | gene-YDR158W_CBS436 | rna-NM_001180465.3_CBS436 | cds-NP_010442.3_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:727528-728625:+ | gene-YDR158W_CBS6412 | rna-NM_001180465.3_CBS6412 | cds-NP_010442.3_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:755944-757041:+ | gene-YDR158W_CBS6413 | rna-NM_001180465.3_CBS6413 | cds-NP_010442.3_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:771045-772142:+ | gene-YDR158W_CENPK1137D | rna-NM_001180465.3_CENPK1137D | cds-NP_010442.3_CENPK1137D | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:741505-742602:+ | gene-YDR158W_EthanolRed | rna-NM_001180465.3_EthanolRed | cds-NP_010442.3_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:749717-750814:+ | gene-YDR158W_FaliES1 | rna-NM_001180465.3_FaliES1 | cds-NP_010442.3_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000401.1:10632-11729:+ | gene-YDR158W_JAY291 | rna-NM_001180465.3_JAY291 | cds-NP_010442.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:758147-759244:+ | gene-YDR158W_MUCL30387 | rna-NM_001180465.3_MUCL30387 | cds-NP_010442.3_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:747064-748161:+ | gene-YDR158W_MUCL30388 | rna-NM_001180465.3_MUCL30388 | cds-NP_010442.3_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:733473-734570:+ | gene-YDR158W_MUCL39482 | rna-NM_001180465.3_MUCL39482 | cds-NP_010442.3_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:671298-672395:+ | gene-YDR158W_MUCL42920 | rna-NM_001180465.3_MUCL42920 | cds-NP_010442.3_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:770280-771377:+ | gene-YDR158W_NCIM3186 | rna-NM_001180465.3_NCIM3186 | cds-NP_010442.3_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:732877-733974:+ | gene-YDR158W_NCYC1407 | rna-NM_001180465.3_NCYC1407 | cds-NP_010442.3_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:752066-753163:+ | gene-YDR158W_PE2H3 | rna-NM_001180465.3_PE2H3 | cds-NP_010442.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:751371-752468:+ | gene-YDR158W_PE2H4 | rna-NM_001180465.3_PE2H4 | cds-NP_010442.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:770357-771454:+ | gene-YDR158W_S288C | rna-NM_001180465.3_S288C | cds-NP_010442.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000009.1:117577-118674:+ | gene-YDR158W_SA1 | rna-NM_001180465.3_SA1 | cds-NP_010442.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:747852-748949:+ | gene-YDR158W_ThermosaccDry | rna-NM_001180465.3_ThermosaccDry | cds-NP_010442.3_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:762778-763875:+ | gene-YDR158W_VR1 | rna-NM_001180465.3_VR1 | cds-NP_010442.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000007.1:10603-11699:+ | gene-YDR158W_ZTW1 | rna-NM_001180465.3_ZTW1 | cds-NP_010442.3_ZTW1 | 99.6 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:754122-755219:+ | gene-YDR158W_Sparadoxus | rna-NM_001180465.3_Sparadoxus | cds-NP_010442.3_Sparadoxus | 91.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |