Gene name: HOL1
Reference locus (S288C): YNR055C
Gene biotype: protein_coding
Description: Protein HOL1; Putative transporter in the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; mutations in membrane-spanning domains permit cation and histidinol uptake
Top 10 interactors (score): QDR1 (0.906); AQR1 (0.906); QDR2 (0.906); FLR1 (0.905); AMF1 (0.815); YMR279C (0.748); VBA4 (0.7); ATR1 (0.698); VBA2 (0.694); SCO1 (0.691); YLR407W (0.682); MET3 (0.677); PET111 (0.574); SEC4 (0.516); GEX1 (0.499); CBS1 (0.499); YRM1 (0.485); MIG3 (0.459); SCO2 (0.454); TPO4 (0.432)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:221964-223724:+ | gene-YNR055C_AKU4011 | rna-NM_001183232.3_AKU4011 | cds-NP_014453.3_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:619997-621757:- | gene-YNR055C_BG1 | rna-NM_001183232.3_BG1 | cds-NP_014453.3_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:730157-731917:- | gene-YNR055C_Bruggeman | rna-NM_001183232.3_Bruggeman | cds-NP_014453.3_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:764606-766366:- | gene-YNR055C_CAT1 | rna-NM_001183232.3_CAT1 | cds-NP_014453.3_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:717314-719074:- | gene-YNR055C_CBS1585 | rna-NM_001183232.3_CBS1585 | cds-NP_014453.3_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:780177-781937:- | gene-YNR055C_CBS436 | rna-NM_001183232.3_CBS436 | cds-NP_014453.3_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:706296-708056:- | gene-YNR055C_CBS6412 | rna-NM_001183232.3_CBS6412 | cds-NP_014453.3_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:707977-709737:- | gene-YNR055C_CBS6413 | rna-NM_001183232.3_CBS6413 | cds-NP_014453.3_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:722062-723822:- | gene-YNR055C_CENPK1137D | rna-NM_001183232.3_CENPK1137D | cds-NP_014453.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:712955-714715:- | gene-YNR055C_EthanolRed | rna-NM_001183232.3_EthanolRed | cds-NP_014453.3_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:704147-705907:- | gene-YNR055C_FaliES1 | rna-NM_001183232.3_FaliES1 | cds-NP_014453.3_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000005.1:21831-23591:+ | gene-YNR055C_JAY291 | rna-NM_001183232.3_JAY291 | cds-NP_014453.3_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:728116-729876:- | gene-YNR055C_MUCL30387 | rna-NM_001183232.3_MUCL30387 | cds-NP_014453.3_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:769729-771489:- | gene-YNR055C_MUCL30388 | rna-NM_001183232.3_MUCL30388 | cds-NP_014453.3_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:708780-710540:- | gene-YNR055C_MUCL39482 | rna-NM_001183232.3_MUCL39482 | cds-NP_014453.3_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:715173-716933:- | gene-YNR055C_MUCL42920 | rna-NM_001183232.3_MUCL42920 | cds-NP_014453.3_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:728395-730155:- | gene-YNR055C_NCIM3186 | rna-NM_001183232.3_NCIM3186 | cds-NP_014453.3_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:711296-713056:- | gene-YNR055C_NCYC1407 | rna-NM_001183232.3_NCYC1407 | cds-NP_014453.3_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:712846-714606:- | gene-YNR055C_PE2H3 | rna-NM_001183232.3_PE2H3 | cds-NP_014453.3_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:714248-716008:- | gene-YNR055C_PE2H4 | rna-NM_001183232.3_PE2H4 | cds-NP_014453.3_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:728426-730186:- | gene-YNR055C_S288C | rna-NM_001183232.3_S288C | cds-NP_014453.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000087.1:39661-41421:+ | gene-YNR055C_SA1 | rna-NM_001183232.3_SA1 | cds-NP_014453.3_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:704490-706250:- | gene-YNR055C_ThermosaccDry | rna-NM_001183232.3_ThermosaccDry | cds-NP_014453.3_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:747734-749494:- | gene-YNR055C_VR1 | rna-NM_001183232.3_VR1 | cds-NP_014453.3_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:614255-616015:- | gene-YNR055C_ZTW1 | rna-NM_001183232.3_ZTW1 | cds-NP_014453.3_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:718535-720295:- | gene-YNR055C_Sparadoxus | rna-NM_001183232.3_Sparadoxus | cds-NP_014453.3_Sparadoxus | 91.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |