HOG1 (YLR113W)


Gene profile

Gene name: HOG1
Reference locus (S288C): YLR113W
Gene biotype: protein_coding

Description: Mitogen-activated protein kinase involved in osmoregulation; controls global reallocation of RNAPII during osmotic shock; mediates recruitment/activation of RNAPII at Hot1p-dependent promoters; binds calmodulin; stimulates antisense transcription to activate CDC28; defines novel S-phase checkpoint with Mrc1p that prevent replication/transcription conflicts; nuclear form represses pseudohyphal growth; autophosphorylates; protein abundance increases under DNA replication stress

Top 10 interactors (score): PTP3 (0.999); SKO1 (0.999); HOT1 (0.999); PTP2 (0.999); PTP1 (0.999); PBS2 (0.999); SHO1 (0.998); PTC1 (0.997); SSK1 (0.996); STE7 (0.996); YPD1 (0.995); MSN2 (0.993); FPS1 (0.992); SLN1 (0.99); SMP1 (0.987); MSN4 (0.984); RCK2 (0.983); MIH1 (0.981); SIC1 (0.98); CRM1 (0.98)

Homologues (species, bitscore): MAPK14 (Homo sapiens, 374.8); Mapk14 (Mus musculus, 375.9); mapk14b (Danio rerio, 376.7); mapk11 (Xenopus tropicalis, 367.1); p38b (Drosophila melanogaster, 371.7); pmk-1 (Caenorhabditis elegans, 340.5); MPK6 (Arabidopsis thaliana, 348.2)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005306.1:354435-355742:+ gene-YLR113W_AKU4011 rna-NM_001182000.1_AKU4011 cds-NP_013214.1_AKU4011 99.4 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000212.1:317881-319188:+ gene-YLR113W_BG1 rna-NM_001182000.1_BG1 cds-NP_013214.1_BG1 99.9 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005514.1:363974-365281:+ gene-YLR113W_Bruggeman rna-NM_001182000.1_Bruggeman cds-NP_013214.1_Bruggeman 100.0 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005530.1:365488-366795:+ gene-YLR113W_CAT1 rna-NM_001182000.1_CAT1 cds-NP_013214.1_CAT1 99.8 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005370.1:361578-362885:+ gene-YLR113W_CBS1585 rna-NM_001182000.1_CBS1585 cds-NP_013214.1_CBS1585 99.4 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005354.1:351826-353133:+ gene-YLR113W_CBS436 rna-NM_001182000.1_CBS436 cds-NP_013214.1_CBS436 99.8 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005338.1:359996-361303:+ gene-YLR113W_CBS6412 rna-NM_001182000.1_CBS6412 cds-NP_013214.1_CBS6412 99.4 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005322.1:361843-363150:+ gene-YLR113W_CBS6413 rna-NM_001182000.1_CBS6413 cds-NP_013214.1_CBS6413 99.4 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001533.1:356640-357947:+ gene-YLR113W_CENPK1137D rna-NM_001182000.1_CENPK1137D cds-NP_013214.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005482.1:354000-355307:+ gene-YLR113W_EthanolRed rna-NM_001182000.1_EthanolRed cds-NP_013214.1_EthanolRed 99.4 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005546.1:353481-354788:+ gene-YLR113W_FaliES1 rna-NM_001182000.1_FaliES1 cds-NP_013214.1_FaliES1 99.4 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000129.1:128428-129735:+ gene-YLR113W_JAY291 rna-NM_001182000.1_JAY291 cds-NP_013214.1_JAY291 99.9 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005418.1:361352-362659:+ gene-YLR113W_MUCL30387 rna-NM_001182000.1_MUCL30387 cds-NP_013214.1_MUCL30387 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005450.1:369016-370323:+ gene-YLR113W_MUCL30388 rna-NM_001182000.1_MUCL30388 cds-NP_013214.1_MUCL30388 100.0 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005290.1:362087-363394:+ gene-YLR113W_MUCL39482 rna-NM_001182000.1_MUCL39482 cds-NP_013214.1_MUCL39482 99.4 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005434.1:362212-363519:+ gene-YLR113W_MUCL42920 rna-NM_001182000.1_MUCL42920 cds-NP_013214.1_MUCL42920 99.4 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011821.1:371594-372901:+ gene-YLR113W_NCIM3186 rna-NM_001182000.1_NCIM3186 cds-NP_013214.1_NCIM3186 99.4 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005274.1:354360-355667:+ gene-YLR113W_NCYC1407 rna-NM_001182000.1_NCYC1407 cds-NP_013214.1_NCYC1407 99.4 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994151.1:359591-360898:+ gene-YLR113W_PE2H3 rna-NM_001182000.1_PE2H3 cds-NP_013214.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999883.1:359332-360639:+ gene-YLR113W_PE2H4 rna-NM_001182000.1_PE2H4 cds-NP_013214.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001144.5:371620-372927:+ gene-YLR113W_S288C rna-NM_001182000.1_S288C cds-NP_013214.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000033.1:1163-2470:- gene-YLR113W_SA1 rna-NM_001182000.1_SA1 cds-NP_013214.1_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005498.1:354440-355747:+ gene-YLR113W_ThermosaccDry rna-NM_001182000.1_ThermosaccDry cds-NP_013214.1_ThermosaccDry 99.5 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005466.1:367831-369138:+ gene-YLR113W_VR1 rna-NM_001182000.1_VR1 cds-NP_013214.1_VR1 99.9 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000023.1:353140-354447:+ gene-YLR113W_ZTW1 rna-NM_001182000.1_ZTW1 cds-NP_013214.1_ZTW1 99.4 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047498.1:361860-363167:+ gene-YLR113W_Sparadoxus rna-NM_001182000.1_Sparadoxus cds-NP_013214.1_Sparadoxus 92.0 100.0 Verified 1 1 1 False True False False False

Additional files