Gene name: HNM1
Reference locus (S288C): YGL077C
Gene biotype: protein_coding
Description: Plasma membrane transporter for choline, ethanolamine, and carnitine; involved in the uptake of nitrogen mustard and the uptake of glycine betaine during hypersaline stress; co-regulated with phospholipid biosynthetic genes and negatively regulated by choline and myo-inositol
Top 10 interactors (score): ITR1 (0.946); CHO1 (0.851); SCT1 (0.842); CHO2 (0.796); INO4 (0.794); EPT1 (0.784); EKI1 (0.772); CPT1 (0.769); OPI3 (0.76); PCT1 (0.742); CKI1 (0.722); OPI1 (0.713); KEL3 (0.713); INO2 (0.704); CDS1 (0.702); AGP2 (0.695); INO1 (0.674); DUR3 (0.666); PSD1 (0.624); ECT1 (0.62)
Homologues (species, bitscore): GABP (Arabidopsis thaliana, 186.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:365231-366922:- | gene-YGL077C_AKU4011 | rna-NM_001180942.1_AKU4011 | cds-NP_011438.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000132.1:38481-40172:+ | gene-YGL077C_BG1 | rna-NM_001180942.1_BG1 | cds-NP_011438.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:367713-369404:- | gene-YGL077C_Bruggeman | rna-NM_001180942.1_Bruggeman | cds-NP_011438.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:364628-366319:- | gene-YGL077C_CAT1 | rna-NM_001180942.1_CAT1 | cds-NP_011438.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:368556-370247:- | gene-YGL077C_CBS1585 | rna-NM_001180942.1_CBS1585 | cds-NP_011438.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:362840-364531:- | gene-YGL077C_CBS436 | rna-NM_001180942.1_CBS436 | cds-NP_011438.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:352936-354627:- | gene-YGL077C_CBS6412 | rna-NM_001180942.1_CBS6412 | cds-NP_011438.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:362860-364551:- | gene-YGL077C_CBS6413 | rna-NM_001180942.1_CBS6413 | cds-NP_011438.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:362414-364105:- | gene-YGL077C_CENPK1137D | rna-NM_001180942.1_CENPK1137D | cds-NP_011438.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:354304-355995:- | gene-YGL077C_EthanolRed | rna-NM_001180942.1_EthanolRed | cds-NP_011438.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:356865-358556:- | gene-YGL077C_FaliES1 | rna-NM_001180942.1_FaliES1 | cds-NP_011438.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000369.1:42568-44259:- | gene-YGL077C_JAY291 | rna-NM_001180942.1_JAY291 | cds-NP_011438.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:364690-366381:- | gene-YGL077C_MUCL30387 | rna-NM_001180942.1_MUCL30387 | cds-NP_011438.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:367675-369366:- | gene-YGL077C_MUCL30388 | rna-NM_001180942.1_MUCL30388 | cds-NP_011438.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:365084-366775:- | gene-YGL077C_MUCL39482 | rna-NM_001180942.1_MUCL39482 | cds-NP_011438.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:369973-371664:- | gene-YGL077C_MUCL42920 | rna-NM_001180942.1_MUCL42920 | cds-NP_011438.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:362225-363916:- | gene-YGL077C_NCIM3186 | rna-NM_001180942.1_NCIM3186 | cds-NP_011438.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:356619-358310:- | gene-YGL077C_NCYC1407 | rna-NM_001180942.1_NCYC1407 | cds-NP_011438.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:358267-359958:- | gene-YGL077C_PE2H3 | rna-NM_001180942.1_PE2H3 | cds-NP_011438.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:363318-365009:- | gene-YGL077C_PE2H4 | rna-NM_001180942.1_PE2H4 | cds-NP_011438.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:362225-363916:- | gene-YGL077C_S288C | rna-NM_001180942.1_S288C | cds-NP_011438.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000089.1:39627-41318:- | gene-YGL077C_SA1 | rna-NM_001180942.1_SA1 | cds-NP_011438.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:357118-358809:- | gene-YGL077C_ThermosaccDry | rna-NM_001180942.1_ThermosaccDry | cds-NP_011438.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:466994-468685:- | gene-YGL077C_VR1 | rna-NM_001180942.1_VR1 | cds-NP_011438.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:354481-356172:- | gene-YGL077C_ZTW1 | rna-NM_001180942.1_ZTW1 | cds-NP_011438.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:360098-361789:- | gene-YGL077C_Sparadoxus | rna-NM_001180942.1_Sparadoxus | cds-NP_011438.1_Sparadoxus | 90.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |