Gene name: HMT1
Reference locus (S288C): YBR034C
Gene biotype: protein_coding
Description: Protein-arginine omega-n methyltransferase hmt1; Protein arginine N-methyltransferase 1; Nuclear SAM-dependent mono- and asymmetric methyltransferase; modifies hnRNPs, including Npl3p and Hrp1p, affecting their activity and nuclear export; methylates U1 snRNP protein Snp1p, ribosomal protein Rps2p, and histones H3 and H4; interacts genetically with genes encoding components of Rpd3(L) and this interaction is important for Rpd3 recruitment to the subtelomeric region
Top 10 interactors (score): NOP1 (0.997); RPS2 (0.996); RMT2 (0.994); NSR1 (0.99); HSL7 (0.989); NPL3 (0.988); PUF6 (0.986); YTM1 (0.982); BRX1 (0.978); ENP1 (0.977); RPF2 (0.974); DBP2 (0.971); GAR1 (0.971); NHP2 (0.968); HTA1 (0.967); HTA2 (0.965); RPB7 (0.962); PWP2 (0.961); UTP5 (0.959); ERB1 (0.956)
Homologues (species, bitscore): PRMT1 (Homo sapiens, 334.3); Prmt1 (Mus musculus, 332.0); prmt1 (Danio rerio, 334.7); prmt1 (Xenopus tropicalis, 334.3); Art1 (Drosophila melanogaster, 338.6); prmt-1 (Caenorhabditis elegans, 322.4); PRMT11 (Arabidopsis thaliana, 355.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:287362-288408:- | gene-YBR034C_AKU4011 | rna-NM_001178382.1_AKU4011 | cds-NP_009590.1_AKU4011 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:277501-278547:- | gene-YBR034C_BG1 | rna-NM_001178382.1_BG1 | cds-NP_009590.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:288089-289135:- | gene-YBR034C_Bruggeman | rna-NM_001178382.1_Bruggeman | cds-NP_009590.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:291779-292825:- | gene-YBR034C_CAT1 | rna-NM_001178382.1_CAT1 | cds-NP_009590.1_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:279658-280704:- | gene-YBR034C_CBS1585 | rna-NM_001178382.1_CBS1585 | cds-NP_009590.1_CBS1585 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:287665-288711:- | gene-YBR034C_CBS436 | rna-NM_001178382.1_CBS436 | cds-NP_009590.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:377541-378587:- | gene-YBR034C_CBS6412 | rna-NM_001178382.1_CBS6412 | cds-NP_009590.1_CBS6412 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:284774-285820:- | gene-YBR034C_CBS6413 | rna-NM_001178382.1_CBS6413 | cds-NP_009590.1_CBS6413 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:298698-299744:- | gene-YBR034C_CENPK1137D | rna-NM_001178382.1_CENPK1137D | cds-NP_009590.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:414139-415185:- | gene-YBR034C_EthanolRed | rna-NM_001178382.1_EthanolRed | cds-NP_009590.1_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:302989-304035:- | gene-YBR034C_FaliES1 | rna-NM_001178382.1_FaliES1 | cds-NP_009590.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000441.1:27688-28734:+ | gene-YBR034C_JAY291 | rna-NM_001178382.1_JAY291 | cds-NP_009590.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:289691-290737:- | gene-YBR034C_MUCL30387 | rna-NM_001178382.1_MUCL30387 | cds-NP_009590.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:289494-290540:- | gene-YBR034C_MUCL30388 | rna-NM_001178382.1_MUCL30388 | cds-NP_009590.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:279646-280692:- | gene-YBR034C_MUCL39482 | rna-NM_001178382.1_MUCL39482 | cds-NP_009590.1_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:286840-287886:- | gene-YBR034C_MUCL42920 | rna-NM_001178382.1_MUCL42920 | cds-NP_009590.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:304727-305773:- | gene-YBR034C_NCIM3186 | rna-NM_001178382.1_NCIM3186 | cds-NP_009590.1_NCIM3186 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:280559-281605:- | gene-YBR034C_NCYC1407 | rna-NM_001178382.1_NCYC1407 | cds-NP_009590.1_NCYC1407 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:292729-293775:- | gene-YBR034C_PE2H3 | rna-NM_001178382.1_PE2H3 | cds-NP_009590.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:290405-291451:- | gene-YBR034C_PE2H4 | rna-NM_001178382.1_PE2H4 | cds-NP_009590.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:304930-305976:- | gene-YBR034C_S288C | rna-NM_001178382.1_S288C | cds-NP_009590.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000017.1:171571-172617:+ | gene-YBR034C_SA1 | rna-NM_001178382.1_SA1 | cds-NP_009590.1_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:302429-303475:- | gene-YBR034C_ThermosaccDry | rna-NM_001178382.1_ThermosaccDry | cds-NP_009590.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:284082-285128:- | gene-YBR034C_VR1 | rna-NM_001178382.1_VR1 | cds-NP_009590.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:278155-279201:- | gene-YBR034C_ZTW1 | rna-NM_001178382.1_ZTW1 | cds-NP_009590.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:314383-315429:- | gene-YBR034C_Sparadoxus | rna-NM_001178382.1_Sparadoxus | cds-NP_009590.1_Sparadoxus | 92.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |