Gene name: HMS2
Reference locus (S288C): YJR147W
Gene biotype: protein_coding
Description: Protein with similarity to heat shock transcription factors; overexpression suppresses the pseudohyphal filamentation defect of a diploid mep1 mep2 homozygous null mutant; HMS2 has a paralog, SKN7, that arose from the whole genome duplication
Top 10 interactors (score): SSA3 (0.926); SSA4 (0.926); SSA2 (0.926); SSA1 (0.926); KSS1 (0.917); FUS3 (0.917); RIM11 (0.91); TOR2 (0.903); TEF1 (0.902); SKI7 (0.901); HBS1 (0.901); LST8 (0.9); KOG1 (0.9); HSP82 (0.788); HSC82 (0.785); YJR149W (0.747); PHD1 (0.695); YMR253C (0.693); BMH2 (0.656); SBA1 (0.642)
Homologues (species, bitscore): HSF2 (Homo sapiens, 55.8); Hsf2 (Mus musculus, 55.5); LOC792628 (Danio rerio, 64.3); hsf3 (Xenopus tropicalis, 50.1); HSFB2A (Arabidopsis thaliana, 74.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:675681-676757:+ | gene-YJR147W_AKU4011 | rna-NM_001181805.1_AKU4011 | cds-NP_012681.1_AKU4011 | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000187.1:17472-18548:- | gene-YJR147W_BG1 | rna-NM_001181805.1_BG1 | cds-NP_012681.1_BG1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:691529-692605:+ | gene-YJR147W_Bruggeman | rna-NM_001181805.1_Bruggeman | cds-NP_012681.1_Bruggeman | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:696142-697218:+ | gene-YJR147W_CAT1 | rna-NM_001181805.1_CAT1 | cds-NP_012681.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:687728-688804:+ | gene-YJR147W_CBS1585 | rna-NM_001181805.1_CBS1585 | cds-NP_012681.1_CBS1585 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:706614-707690:+ | gene-YJR147W_CBS436 | rna-NM_001181805.1_CBS436 | cds-NP_012681.1_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:674501-675577:+ | gene-YJR147W_CBS6412 | rna-NM_001181805.1_CBS6412 | cds-NP_012681.1_CBS6412 | 98.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:677160-678236:+ | gene-YJR147W_CBS6413 | rna-NM_001181805.1_CBS6413 | cds-NP_012681.1_CBS6413 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:686555-687631:+ | gene-YJR147W_CENPK1137D | rna-NM_001181805.1_CENPK1137D | cds-NP_012681.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:680099-681175:+ | gene-YJR147W_EthanolRed | rna-NM_001181805.1_EthanolRed | cds-NP_012681.1_EthanolRed | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:691715-692791:+ | gene-YJR147W_FaliES1 | rna-NM_001181805.1_FaliES1 | cds-NP_012681.1_FaliES1 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000095.1:1470-2546:+ | gene-YJR147W_JAY291 | rna-NM_001181805.1_JAY291 | cds-NP_012681.1_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:690438-691514:+ | gene-YJR147W_MUCL30387 | rna-NM_001181805.1_MUCL30387 | cds-NP_012681.1_MUCL30387 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:687925-689001:+ | gene-YJR147W_MUCL30388 | rna-NM_001181805.1_MUCL30388 | cds-NP_012681.1_MUCL30388 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:681211-682287:+ | gene-YJR147W_MUCL39482 | rna-NM_001181805.1_MUCL39482 | cds-NP_012681.1_MUCL39482 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:501031-502107:+ | gene-YJR147W_MUCL42920 | rna-NM_001181805.1_MUCL42920 | cds-NP_012681.1_MUCL42920 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:704175-705251:+ | gene-YJR147W_NCIM3186 | rna-NM_001181805.1_NCIM3186 | cds-NP_012681.1_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:678980-680056:+ | gene-YJR147W_NCYC1407 | rna-NM_001181805.1_NCYC1407 | cds-NP_012681.1_NCYC1407 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:696963-698039:+ | gene-YJR147W_PE2H3 | rna-NM_001181805.1_PE2H3 | cds-NP_012681.1_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:690652-691728:+ | gene-YJR147W_PE2H4 | rna-NM_001181805.1_PE2H4 | cds-NP_012681.1_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:704196-705272:+ | gene-YJR147W_S288C | rna-NM_001181805.1_S288C | cds-NP_012681.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000108.1:23201-24277:- | gene-YJR147W_SA1 | rna-NM_001181805.1_SA1 | cds-NP_012681.1_SA1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:685742-686818:+ | gene-YJR147W_ThermosaccDry | rna-NM_001181805.1_ThermosaccDry | cds-NP_012681.1_ThermosaccDry | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:687883-688959:+ | gene-YJR147W_VR1 | rna-NM_001181805.1_VR1 | cds-NP_012681.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:664840-665916:+ | gene-YJR147W_ZTW1 | rna-NM_001181805.1_ZTW1 | cds-NP_012681.1_ZTW1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:699152-700228:+ | gene-YJR147W_Sparadoxus | rna-NM_001181805.1_Sparadoxus | cds-NP_012681.1_Sparadoxus | 88.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |