Gene name: HMRA2
Reference locus (S288C): YCR096C
Gene biotype: protein_coding
Description: Silenced copy of a2 at HMR; similarity to Alpha2p; required along with a1p for inhibiting expression of the HO endonuclease in a/alpha HO/HO diploid cells with an active mating-type interconversion system; Belongs to the TALE/M-ATYP homeobox family
Top 10 interactors (score): HMRA1 (0.983); HMLALPHA2 (0.979); MATALPHA1 (0.92); MCM1 (0.811); MATALPHA2 (0.802); HMLALPHA1 (0.796); TAF2 (0.696); OCA4 (0.673); DON1 (0.616); YPR015C (0.609); BUD5 (0.588); SPH1 (0.574); TOG1 (0.57); SPO74 (0.568); IMG1 (0.564); MPC54 (0.563); EMI1 (0.562); MLH2 (0.527); GEX1 (0.483); FAP7 (0.465)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005297.1:193525-193884:- | gene-YCR096C_AKU4011 | rna-NM_001178802.1_AKU4011 | cds-NP_010020.1_AKU4011 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | MBVY01000070.1:51-410:- | gene-YCR096C_Bruggeman | rna-NM_001178802.1_Bruggeman | cds-NP_010020.1_Bruggeman | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:13561-13920:- | gene-YCR096C_CAT1 | rna-NM_001178802.1_CAT1 | cds-NP_010020.1_CAT1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005361.1:188286-188645:- | gene-YCR096C_CBS1585 | rna-NM_001178802.1_CBS1585 | cds-NP_010020.1_CBS1585 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:199933-200292:- | gene-YCR096C_CBS436 | rna-NM_001178802.1_CBS436 | cds-NP_010020.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | MBVQ01000048.1:146-505:- | gene-YCR096C_CBS6412 | rna-NM_001178802.1_CBS6412 | cds-NP_010020.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005313.1:194463-194822:- | gene-YCR096C_CBS6413 | rna-NM_001178802.1_CBS6413 | cds-NP_010020.1_CBS6413 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001524.1:198912-199271:- | gene-YCR096C_CENPK1137D | rna-NM_001178802.1_CENPK1137D | cds-NP_010020.1_CENPK1137D | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | MBWB01000013.1:146-505:- | gene-YCR096C_EthanolRed | rna-NM_001178802.1_EthanolRed | cds-NP_010020.1_EthanolRed | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:194402-194761:- | gene-YCR096C_FaliES1 | rna-NM_001178802.1_FaliES1 | cds-NP_010020.1_FaliES1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000420.1:146-505:- | gene-YCR096C_JAY291 | rna-NM_001178802.1_JAY291 | cds-NP_010020.1_JAY291 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005409.1:281986-282283:- | gene-YCR096C_MUCL30387 | rna-NM_001178802.1_MUCL30387 | cds-NP_010020.1_MUCL30387 | 82.7 | 82.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005441.1:280805-281164:- | gene-YCR096C_MUCL30388 | rna-NM_001178802.1_MUCL30388 | cds-NP_010020.1_MUCL30388 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:194610-194969:- | gene-YCR096C_MUCL39482 | rna-NM_001178802.1_MUCL39482 | cds-NP_010020.1_MUCL39482 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | MBVV01000156.1:51-410:- | gene-YCR096C_MUCL42920 | rna-NM_001178802.1_MUCL42920 | cds-NP_010020.1_MUCL42920 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011812.1:292811-293170:- | gene-YCR096C_NCIM3186 | rna-NM_001178802.1_NCIM3186 | cds-NP_010020.1_NCIM3186 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005265.1:290412-290771:- | gene-YCR096C_NCYC1407 | rna-NM_001178802.1_NCYC1407 | cds-NP_010020.1_NCYC1407 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:304433-304792:- | gene-YCR096C_PE2H3 | rna-NM_001178802.1_PE2H3 | cds-NP_010020.1_PE2H3 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:292985-293344:- | gene-YCR096C_PE2H4 | rna-NM_001178802.1_PE2H4 | cds-NP_010020.1_PE2H4 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:293179-293538:- | gene-YCR096C_S288C | rna-NM_001178802.1_S288C | cds-NP_010020.1_S288C | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005489.1:194929-195236:- | gene-YCR096C_ThermosaccDry | rna-NM_001178802.1_ThermosaccDry | cds-NP_010020.1_ThermosaccDry | 85.5 | 85.5 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:16411-16770:- | gene-YCR096C_VR1 | rna-NM_001178802.1_VR1 | cds-NP_010020.1_VR1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:286528-286887:- | gene-YCR096C_ZTW1 | rna-NM_001178802.1_ZTW1 | cds-NP_010020.1_ZTW1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047489.1:321159-321518:- | gene-YCR096C_Sparadoxus | rna-NM_001178802.1_Sparadoxus | cds-NP_010020.1_Sparadoxus | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |