Gene name: HMRA1
Reference locus (S288C): YCR097W
Gene biotype: protein_coding
Description: Silenced mating-type protein a1; Silenced copy of a1 at HMR; homeobox corepressor that interacts with Alpha2p to repress haploid-specific gene transcription in diploid cells
Top 10 interactors (score): HMLALPHA2 (0.999); HMRA2 (0.983); MATALPHA2 (0.983); MATALPHA1 (0.957); HMLALPHA1 (0.909); STE2 (0.887); STE6 (0.876); MFA2 (0.829); RME1 (0.8); AGA2 (0.732); BAR1 (0.728); SIR3 (0.716); SIR4 (0.712); EFM5 (0.7); YOR318C (0.694); YFR057W (0.671); SIR2 (0.651); YPL278C (0.618); CET1 (0.611); GFD2 (0.575)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005297.1:288782-289268:+ | gene-YCR097W_AKU4011 | rna-NM_001178804.1_AKU4011 | cds-NP_010021.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000054.1:143-629:- | gene-YCR097W_BG1 | rna-NM_001178804.1_BG1 | cds-NP_010021.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005505.1:285591-286077:+ | gene-YCR097W_Bruggeman | rna-NM_001178804.1_Bruggeman | cds-NP_010021.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:295575-296061:+ | gene-YCR097W_CAT1 | rna-NM_001178804.1_CAT1 | cds-NP_010021.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005361.1:283529-284015:+ | gene-YCR097W_CBS1585 | rna-NM_001178804.1_CBS1585 | cds-NP_010021.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:294907-295393:+ | gene-YCR097W_CBS436 | rna-NM_001178804.1_CBS436 | cds-NP_010021.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005329.1:274679-275165:+ | gene-YCR097W_CBS6412 | rna-NM_001178804.1_CBS6412 | cds-NP_010021.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005313.1:289228-289714:+ | gene-YCR097W_CBS6413 | rna-NM_001178804.1_CBS6413 | cds-NP_010021.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001524.1:293040-293526:+ | gene-YCR097W_CENPK1137D | rna-NM_001178804.1_CENPK1137D | cds-NP_010021.1_CENPK1137D | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005473.1:284428-284914:+ | gene-YCR097W_EthanolRed | rna-NM_001178804.1_EthanolRed | cds-NP_010021.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:290966-291452:+ | gene-YCR097W_FaliES1 | rna-NM_001178804.1_FaliES1 | cds-NP_010021.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000179.1:133-619:+ | gene-YCR097W_JAY291 | rna-NM_001178804.1_JAY291 | cds-NP_010021.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005409.1:282580-283066:+ | gene-YCR097W_MUCL30387 | rna-NM_001178804.1_MUCL30387 | cds-NP_010021.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005441.1:281710-282196:+ | gene-YCR097W_MUCL30388 | rna-NM_001178804.1_MUCL30388 | cds-NP_010021.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:290173-290659:+ | gene-YCR097W_MUCL39482 | rna-NM_001178804.1_MUCL39482 | cds-NP_010021.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005425.1:192562-193048:+ | gene-YCR097W_MUCL42920 | rna-NM_001178804.1_MUCL42920 | cds-NP_010021.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011812.1:293467-293953:+ | gene-YCR097W_NCIM3186 | rna-NM_001178804.1_NCIM3186 | cds-NP_010021.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005265.1:291317-291803:+ | gene-YCR097W_NCYC1407 | rna-NM_001178804.1_NCYC1407 | cds-NP_010021.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:305089-305575:+ | gene-YCR097W_PE2H3 | rna-NM_001178804.1_PE2H3 | cds-NP_010021.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:200202-200688:+ | gene-YCR097W_1_PE2H4 | Unknown | Unknown | 100.0 | 100.0 | Verified | 2 | 2 | 1 | Unknown | Unknown | Unknown | Unknown | Unknown |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:293641-294127:+ | gene-YCR097W_PE2H4 | rna-NM_001178804.1_PE2H4 | cds-NP_010021.1_PE2H4 | 100.0 | 100.0 | Verified | 2 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:293835-294321:+ | gene-YCR097W_S288C | rna-NM_001178804.1_S288C | cds-NP_010021.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000044.1:190-676:+ | gene-YCR097W_SA1 | rna-NM_001178804.1_SA1 | cds-NP_010021.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005489.1:290482-290968:+ | gene-YCR097W_ThermosaccDry | rna-NM_001178804.1_ThermosaccDry | cds-NP_010021.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:300627-301113:+ | gene-YCR097W_VR1 | rna-NM_001178804.1_VR1 | cds-NP_010021.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:287184-287670:+ | gene-YCR097W_ZTW1 | rna-NM_001178804.1_ZTW1 | cds-NP_010021.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047489.1:321813-322301:+ | gene-YCR097W_Sparadoxus | rna-NM_001178804.1_Sparadoxus | cds-NP_010021.1_Sparadoxus | 93.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |