Gene name: HMF1
Reference locus (S288C): YER057C
Gene biotype: protein_coding
Description: Protein HMF1; Member of the p14.5 protein family; functionally complements Mmf1p function when targeted to mitochondria; heat shock inducible; high-dosage growth inhibitor; forms a homotrimer in vitro; HMF1 has a paralog, MMF1, that arose from the whole genome duplication; Belongs to the RutC family
Top 10 interactors (score): DPH6 (0.919); DPH5 (0.825); RRT2 (0.81); DPH1 (0.778); KTI11 (0.741); MCX1 (0.733); DPH2 (0.709); MRX14 (0.705); MRX3 (0.696); MRPL38 (0.696); TRP4 (0.686); MRPL40 (0.676); QCR10 (0.671); ARO7 (0.671); LIH1 (0.659); YMR31 (0.652); PEP4 (0.651); HSP33 (0.638); JJJ3 (0.624); REX2 (0.613)
Homologues (species, bitscore): HRSP12 (Homo sapiens, 99.4); Hrsp12 (Mus musculus, 100.1); hrsp12 (Danio rerio, 83.6); UK114 (Drosophila melanogaster, 87.0); C23G10.2 (Caenorhabditis elegans, 87.4); AT3G20390 (Arabidopsis thaliana, 110.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:264535-264924:- | gene-YER057C_AKU4011 | rna-NM_001178948.3_AKU4011 | cds-NP_010978.3_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000011.1:160854-161243:+ | gene-YER057C_BG1 | rna-NM_001178948.3_BG1 | cds-NP_010978.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:273845-274234:- | gene-YER057C_Bruggeman | rna-NM_001178948.3_Bruggeman | cds-NP_010978.3_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:267487-267876:- | gene-YER057C_CAT1 | rna-NM_001178948.3_CAT1 | cds-NP_010978.3_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:264391-264780:- | gene-YER057C_CBS1585 | rna-NM_001178948.3_CBS1585 | cds-NP_010978.3_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:266298-266687:- | gene-YER057C_CBS436 | rna-NM_001178948.3_CBS436 | cds-NP_010978.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:263861-264250:- | gene-YER057C_CBS6412 | rna-NM_001178948.3_CBS6412 | cds-NP_010978.3_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:269867-270256:- | gene-YER057C_CBS6413 | rna-NM_001178948.3_CBS6413 | cds-NP_010978.3_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:268596-268985:- | gene-YER057C_CENPK1137D | rna-NM_001178948.3_CENPK1137D | cds-NP_010978.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:264875-265264:- | gene-YER057C_EthanolRed | rna-NM_001178948.3_EthanolRed | cds-NP_010978.3_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:265328-265717:- | gene-YER057C_FaliES1 | rna-NM_001178948.3_FaliES1 | cds-NP_010978.3_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000382.1:6783-7172:+ | gene-YER057C_JAY291 | rna-NM_001178948.3_JAY291 | cds-NP_010978.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:269281-269670:- | gene-YER057C_MUCL30387 | rna-NM_001178948.3_MUCL30387 | cds-NP_010978.3_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:264959-265348:- | gene-YER057C_MUCL30388 | rna-NM_001178948.3_MUCL30388 | cds-NP_010978.3_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:263426-263815:- | gene-YER057C_MUCL39482 | rna-NM_001178948.3_MUCL39482 | cds-NP_010978.3_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:270487-270876:- | gene-YER057C_MUCL42920 | rna-NM_001178948.3_MUCL42920 | cds-NP_010978.3_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:270736-271125:- | gene-YER057C_NCIM3186 | rna-NM_001178948.3_NCIM3186 | cds-NP_010978.3_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:268489-268878:- | gene-YER057C_NCYC1407 | rna-NM_001178948.3_NCYC1407 | cds-NP_010978.3_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:279139-279528:- | gene-YER057C_PE2H3 | rna-NM_001178948.3_PE2H3 | cds-NP_010978.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:269080-269469:- | gene-YER057C_PE2H4 | rna-NM_001178948.3_PE2H4 | cds-NP_010978.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:270737-271126:- | gene-YER057C_S288C | rna-NM_001178948.3_S288C | cds-NP_010978.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000059.1:57259-57648:- | gene-YER057C_SA1 | rna-NM_001178948.3_SA1 | cds-NP_010978.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:266124-266513:- | gene-YER057C_ThermosaccDry | rna-NM_001178948.3_ThermosaccDry | cds-NP_010978.3_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:265822-266211:- | gene-YER057C_VR1 | rna-NM_001178948.3_VR1 | cds-NP_010978.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000009.1:263306-263695:- | gene-YER057C_ZTW1 | rna-NM_001178948.3_ZTW1 | cds-NP_010978.3_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:267182-267571:- | gene-YER057C_Sparadoxus | rna-NM_001178948.3_Sparadoxus | cds-NP_010978.3_Sparadoxus | 91.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |