Gene name: HLR1
Reference locus (S288C): YDR528W
Gene biotype: protein_coding
Description: Protein involved in regulation of cell wall composition and integrity; also involved in cell wall response to osmotic stress; overproduction suppresses a lysis sensitive PKC mutation; HLR1 has a paralog, LRE1, that arose from the whole genome duplication
Top 10 interactors (score): EMW1 (0.75); DOP1 (0.696); FCY21 (0.65); SPS2 (0.619); KEG1 (0.596); TDA1 (0.596); FIT1 (0.583); YHR213W (0.574); PLM2 (0.567); PLB3 (0.554); KTR6 (0.526); SFK1 (0.497); YLR278C (0.487); CBK1 (0.466); TIR3 (0.454); KIC1 (0.453); KCC4 (0.451); DAN1 (0.45); FMP48 (0.402)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:1434622-1435893:+ | gene-YDR528W_AKU4011 | rna-NM_001180836.3_AKU4011 | cds-NP_010817.3_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000073.1:76241-77512:+ | gene-YDR528W_BG1 | rna-NM_001180836.3_BG1 | cds-NP_010817.3_BG1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:1465913-1467184:+ | gene-YDR528W_Bruggeman | rna-NM_001180836.3_Bruggeman | cds-NP_010817.3_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:1443081-1444352:+ | gene-YDR528W_CAT1 | rna-NM_001180836.3_CAT1 | cds-NP_010817.3_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:1429350-1430621:+ | gene-YDR528W_CBS1585 | rna-NM_001180836.3_CBS1585 | cds-NP_010817.3_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:1448549-1449820:+ | gene-YDR528W_CBS436 | rna-NM_001180836.3_CBS436 | cds-NP_010817.3_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:1424514-1425785:+ | gene-YDR528W_CBS6412 | rna-NM_001180836.3_CBS6412 | cds-NP_010817.3_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:1448010-1449281:+ | gene-YDR528W_CBS6413 | rna-NM_001180836.3_CBS6413 | cds-NP_010817.3_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1493263-1494534:+ | gene-YDR528W_CENPK1137D | rna-NM_001180836.3_CENPK1137D | cds-NP_010817.3_CENPK1137D | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:1437881-1439152:+ | gene-YDR528W_EthanolRed | rna-NM_001180836.3_EthanolRed | cds-NP_010817.3_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:1441433-1442704:+ | gene-YDR528W_FaliES1 | rna-NM_001180836.3_FaliES1 | cds-NP_010817.3_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000026.1:139773-141044:+ | gene-YDR528W_JAY291 | rna-NM_001180836.3_JAY291 | cds-NP_010817.3_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:1449002-1450273:+ | gene-YDR528W_MUCL30387 | rna-NM_001180836.3_MUCL30387 | cds-NP_010817.3_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:1430450-1431721:+ | gene-YDR528W_MUCL30388 | rna-NM_001180836.3_MUCL30388 | cds-NP_010817.3_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:1420847-1422118:+ | gene-YDR528W_MUCL39482 | rna-NM_001180836.3_MUCL39482 | cds-NP_010817.3_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:1363476-1364747:+ | gene-YDR528W_MUCL42920 | rna-NM_001180836.3_MUCL42920 | cds-NP_010817.3_MUCL42920 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1494509-1495780:+ | gene-YDR528W_NCIM3186 | rna-NM_001180836.3_NCIM3186 | cds-NP_010817.3_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:1434140-1435411:+ | gene-YDR528W_NCYC1407 | rna-NM_001180836.3_NCYC1407 | cds-NP_010817.3_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1445040-1446311:+ | gene-YDR528W_PE2H3 | rna-NM_001180836.3_PE2H3 | cds-NP_010817.3_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1450508-1451779:+ | gene-YDR528W_PE2H4 | rna-NM_001180836.3_PE2H4 | cds-NP_010817.3_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1494586-1495857:+ | gene-YDR528W_S288C | rna-NM_001180836.3_S288C | cds-NP_010817.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000004.1:121258-122529:- | gene-YDR528W_SA1 | rna-NM_001180836.3_SA1 | cds-NP_010817.3_SA1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:1445655-1446926:+ | gene-YDR528W_ThermosaccDry | rna-NM_001180836.3_ThermosaccDry | cds-NP_010817.3_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:1461430-1462701:+ | gene-YDR528W_VR1 | rna-NM_001180836.3_VR1 | cds-NP_010817.3_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:488306-489577:+ | gene-YDR528W_ZTW1 | rna-NM_001180836.3_ZTW1 | cds-NP_010817.3_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:1454613-1455878:+ | gene-YDR528W_Sparadoxus | rna-NM_001180836.3_Sparadoxus | cds-NP_010817.3_Sparadoxus | 88.2 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |