Gene name: HLJ1
Reference locus (S288C): YMR161W
Gene biotype: protein_coding
Description: Protein HLJ1; Co-chaperone for Hsp40p; anchored in the ER membrane; with its homolog Ydj1p promotes ER-associated protein degradation (ERAD) of integral membrane substrates; similar to E. coli DnaJ
Top 10 interactors (score): KAR2 (0.949); SSE1 (0.916); SSA1 (0.909); SWA2 (0.839); SSA3 (0.837); ECM10 (0.83); SSA4 (0.828); JAC1 (0.827); ERJ5 (0.827); SSA2 (0.827); ZUO1 (0.826); SSE2 (0.822); HRD1 (0.812); CWC23 (0.811); SSQ1 (0.806); SSM4 (0.803); SSZ1 (0.8); MDJ2 (0.797); PAM18 (0.796); JID1 (0.787)
Homologues (species, bitscore): DNAJB12 (Homo sapiens, 88.6); Dnajb12 (Mus musculus, 90.1); dnajc18 (Danio rerio, 92.4); dnajb12 (Xenopus tropicalis, 90.1); CG3061 (Drosophila melanogaster, 92.8); dnj-1 (Caenorhabditis elegans, 92.4); AT3G57340 (Arabidopsis thaliana, 95.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:617223-617897:+ | gene-YMR161W_AKU4011 | rna-NM_001182665.1_AKU4011 | cds-NP_013884.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000068.1:54652-55326:- | gene-YMR161W_BG1 | rna-NM_001182665.1_BG1 | cds-NP_013884.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:560398-561072:+ | gene-YMR161W_Bruggeman | rna-NM_001182665.1_Bruggeman | cds-NP_013884.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:562605-563279:+ | gene-YMR161W_CAT1 | rna-NM_001182665.1_CAT1 | cds-NP_013884.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:550148-550822:+ | gene-YMR161W_CBS1585 | rna-NM_001182665.1_CBS1585 | cds-NP_013884.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:554015-554689:+ | gene-YMR161W_CBS436 | rna-NM_001182665.1_CBS436 | cds-NP_013884.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:662765-663439:+ | gene-YMR161W_CBS6412 | rna-NM_001182665.1_CBS6412 | cds-NP_013884.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:548698-549372:+ | gene-YMR161W_CBS6413 | rna-NM_001182665.1_CBS6413 | cds-NP_013884.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:572221-572895:+ | gene-YMR161W_CENPK1137D | rna-NM_001182665.1_CENPK1137D | cds-NP_013884.1_CENPK1137D | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:548313-548987:+ | gene-YMR161W_EthanolRed | rna-NM_001182665.1_EthanolRed | cds-NP_013884.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:555312-555986:+ | gene-YMR161W_FaliES1 | rna-NM_001182665.1_FaliES1 | cds-NP_013884.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000292.1:21547-22221:- | gene-YMR161W_JAY291 | rna-NM_001182665.1_JAY291 | cds-NP_013884.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:555108-555782:+ | gene-YMR161W_MUCL30387 | rna-NM_001182665.1_MUCL30387 | cds-NP_013884.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:560632-561306:+ | gene-YMR161W_MUCL30388 | rna-NM_001182665.1_MUCL30388 | cds-NP_013884.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:550834-551508:+ | gene-YMR161W_MUCL39482 | rna-NM_001182665.1_MUCL39482 | cds-NP_013884.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:557704-558378:+ | gene-YMR161W_MUCL42920 | rna-NM_001182665.1_MUCL42920 | cds-NP_013884.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:577672-578346:+ | gene-YMR161W_NCIM3186 | rna-NM_001182665.1_NCIM3186 | cds-NP_013884.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:550536-551210:+ | gene-YMR161W_NCYC1407 | rna-NM_001182665.1_NCYC1407 | cds-NP_013884.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:560914-561588:+ | gene-YMR161W_PE2H3 | rna-NM_001182665.1_PE2H3 | cds-NP_013884.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:561364-562038:+ | gene-YMR161W_PE2H4 | rna-NM_001182665.1_PE2H4 | cds-NP_013884.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:577718-578392:+ | gene-YMR161W_S288C | rna-NM_001182665.1_S288C | cds-NP_013884.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000002.1:228043-228717:- | gene-YMR161W_SA1 | rna-NM_001182665.1_SA1 | cds-NP_013884.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:550960-551634:+ | gene-YMR161W_ThermosaccDry | rna-NM_001182665.1_ThermosaccDry | cds-NP_013884.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:563421-564095:+ | gene-YMR161W_VR1 | rna-NM_001182665.1_VR1 | cds-NP_013884.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:525853-526527:+ | gene-YMR161W_ZTW1 | rna-NM_001182665.1_ZTW1 | cds-NP_013884.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:563434-564108:+ | gene-YMR161W_Sparadoxus | rna-NM_001182665.1_Sparadoxus | cds-NP_013884.1_Sparadoxus | 92.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |