Gene name: HIS7
Reference locus (S288C): YBR248C
Gene biotype: protein_coding
Description: Imidazole glycerol phosphate synthase; glutamine amidotransferase:cyclase that catalyzes the fifth step of histidine biosynthesis and also produces 5-aminoimidazole-4-carboxamide ribotide (AICAR), a purine precursor; In the C-terminal section; belongs to the HisA/HisF family
Top 10 interactors (score): HIS4 (0.999); HIS6 (0.999); TRP3 (0.996); HIS3 (0.996); HIS5 (0.989); GUA1 (0.984); HIS1 (0.979); ADE5,7 (0.976); TRP5 (0.974); TRP1 (0.956); URA3 (0.914); TRP2 (0.907); ADE16 (0.904); ADE17 (0.904); ADE6 (0.881); LYS2 (0.881); BAS1 (0.85); ADE13 (0.849); LEU2 (0.84); ARG5,6 (0.834)
Homologues (species, bitscore): AT-HF (Arabidopsis thaliana, 533.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:699107-700765:- | gene-YBR248C_AKU4011 | rna-NM_001178596.3_AKU4011 | cds-NP_009807.3_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000066.1:70112-71770:- | gene-YBR248C_BG1 | rna-NM_001178596.3_BG1 | cds-NP_009807.3_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:700259-701917:- | gene-YBR248C_Bruggeman | rna-NM_001178596.3_Bruggeman | cds-NP_009807.3_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:703750-705408:- | gene-YBR248C_CAT1 | rna-NM_001178596.3_CAT1 | cds-NP_009807.3_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:690673-692331:- | gene-YBR248C_CBS1585 | rna-NM_001178596.3_CBS1585 | cds-NP_009807.3_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:697103-698761:- | gene-YBR248C_CBS436 | rna-NM_001178596.3_CBS436 | cds-NP_009807.3_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:785278-786936:- | gene-YBR248C_CBS6412 | rna-NM_001178596.3_CBS6412 | cds-NP_009807.3_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:696721-698379:- | gene-YBR248C_CBS6413 | rna-NM_001178596.3_CBS6413 | cds-NP_009807.3_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:708717-710375:- | gene-YBR248C_CENPK1137D | rna-NM_001178596.3_CENPK1137D | cds-NP_009807.3_CENPK1137D | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:822129-823787:- | gene-YBR248C_EthanolRed | rna-NM_001178596.3_EthanolRed | cds-NP_009807.3_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:715476-717134:- | gene-YBR248C_FaliES1 | rna-NM_001178596.3_FaliES1 | cds-NP_009807.3_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000067.1:86931-88589:+ | gene-YBR248C_JAY291 | rna-NM_001178596.3_JAY291 | cds-NP_009807.3_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:702302-703960:- | gene-YBR248C_MUCL30387 | rna-NM_001178596.3_MUCL30387 | cds-NP_009807.3_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:719385-721043:- | gene-YBR248C_MUCL30388 | rna-NM_001178596.3_MUCL30388 | cds-NP_009807.3_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:688980-690638:- | gene-YBR248C_MUCL39482 | rna-NM_001178596.3_MUCL39482 | cds-NP_009807.3_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:698837-700495:- | gene-YBR248C_MUCL42920 | rna-NM_001178596.3_MUCL42920 | cds-NP_009807.3_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:714604-716262:- | gene-YBR248C_NCIM3186 | rna-NM_001178596.3_NCIM3186 | cds-NP_009807.3_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:690869-692527:- | gene-YBR248C_NCYC1407 | rna-NM_001178596.3_NCYC1407 | cds-NP_009807.3_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:713974-715632:- | gene-YBR248C_PE2H3 | rna-NM_001178596.3_PE2H3 | cds-NP_009807.3_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:711650-713308:- | gene-YBR248C_PE2H4 | rna-NM_001178596.3_PE2H4 | cds-NP_009807.3_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:714807-716465:- | gene-YBR248C_S288C | rna-NM_001178596.3_S288C | cds-NP_009807.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000019.1:69935-71593:- | gene-YBR248C_SA1 | rna-NM_001178596.3_SA1 | cds-NP_009807.3_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:714468-716126:- | gene-YBR248C_ThermosaccDry | rna-NM_001178596.3_ThermosaccDry | cds-NP_009807.3_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:694682-696340:- | gene-YBR248C_VR1 | rna-NM_001178596.3_VR1 | cds-NP_009807.3_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:687319-688977:- | gene-YBR248C_ZTW1 | rna-NM_001178596.3_ZTW1 | cds-NP_009807.3_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:731281-732939:- | gene-YBR248C_Sparadoxus | rna-NM_001178596.3_Sparadoxus | cds-NP_009807.3_Sparadoxus | 90.8 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |