Gene name: HIR1
Reference locus (S288C): YBL008W
Gene biotype: protein_coding
Description: Protein HIR1; Subunit of the HIR complex; HIR is a nucleosome assembly complex involved in regulation of histone gene transcription; contributes to nucleosome formation, heterochromatic gene silencing, and formation of functional kinetochores
Top 10 interactors (score): ASF1 (0.999); HPC2 (0.999); HIR3 (0.999); HIR2 (0.996); RLF2 (0.993); HAT2 (0.981); HHT1 (0.968); RTT106 (0.966); HHT2 (0.941); MSI1 (0.941); HHF1 (0.925); HTB1 (0.908); HAT1 (0.874); SNF5 (0.856); HIF1 (0.844); HTA1 (0.84); CSE4 (0.823); RTT109 (0.821); HHF2 (0.82); SPT6 (0.804)
Homologues (species, bitscore): HIRA (Homo sapiens, 230.7); Hira (Mus musculus, 231.9); hira (Danio rerio, 243.0); hira (Xenopus tropicalis, 231.5); Hira (Drosophila melanogaster, 231.1); K10D2.1 (Caenorhabditis elegans, 119.4); HIRA (Arabidopsis thaliana, 237.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:203757-206279:+ | gene-YBL008W_AKU4011 | rna-NM_001178248.2_AKU4011 | cds-NP_009545.2_AKU4011 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:194080-196599:+ | gene-YBL008W_BG1 | rna-NM_001178248.2_BG1 | cds-NP_009545.2_BG1 | 99.5 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:204414-206936:+ | gene-YBL008W_Bruggeman | rna-NM_001178248.2_Bruggeman | cds-NP_009545.2_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:206939-209461:+ | gene-YBL008W_CAT1 | rna-NM_001178248.2_CAT1 | cds-NP_009545.2_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:196045-198567:+ | gene-YBL008W_CBS1585 | rna-NM_001178248.2_CBS1585 | cds-NP_009545.2_CBS1585 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:204253-206772:+ | gene-YBL008W_CBS436 | rna-NM_001178248.2_CBS436 | cds-NP_009545.2_CBS436 | 99.5 | 99.8 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:294545-297067:+ | gene-YBL008W_CBS6412 | rna-NM_001178248.2_CBS6412 | cds-NP_009545.2_CBS6412 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:201366-203888:+ | gene-YBL008W_CBS6413 | rna-NM_001178248.2_CBS6413 | cds-NP_009545.2_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:203417-205939:+ | gene-YBL008W_CENPK1137D | rna-NM_001178248.2_CENPK1137D | cds-NP_009545.2_CENPK1137D | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:330987-333509:+ | gene-YBL008W_EthanolRed | rna-NM_001178248.2_EthanolRed | cds-NP_009545.2_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:218588-221110:+ | gene-YBL008W_FaliES1 | rna-NM_001178248.2_FaliES1 | cds-NP_009545.2_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000048.1:76012-78531:- | gene-YBL008W_JAY291 | rna-NM_001178248.2_JAY291 | cds-NP_009545.2_JAY291 | 99.5 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:205015-207534:+ | gene-YBL008W_MUCL30387 | rna-NM_001178248.2_MUCL30387 | cds-NP_009545.2_MUCL30387 | 99.5 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:205000-207519:+ | gene-YBL008W_MUCL30388 | rna-NM_001178248.2_MUCL30388 | cds-NP_009545.2_MUCL30388 | 99.4 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:195981-198503:+ | gene-YBL008W_MUCL39482 | rna-NM_001178248.2_MUCL39482 | cds-NP_009545.2_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:203421-205943:+ | gene-YBL008W_MUCL42920 | rna-NM_001178248.2_MUCL42920 | cds-NP_009545.2_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:209450-211972:+ | gene-YBL008W_NCIM3186 | rna-NM_001178248.2_NCIM3186 | cds-NP_009545.2_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:197157-199679:+ | gene-YBL008W_NCYC1407 | rna-NM_001178248.2_NCYC1407 | cds-NP_009545.2_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:209327-211846:+ | gene-YBL008W_PE2H3 | rna-NM_001178248.2_PE2H3 | cds-NP_009545.2_PE2H3 | 99.5 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:206971-209490:+ | gene-YBL008W_PE2H4 | rna-NM_001178248.2_PE2H4 | cds-NP_009545.2_PE2H4 | 99.5 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:209653-212175:+ | gene-YBL008W_S288C | rna-NM_001178248.2_S288C | cds-NP_009545.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000037.1:84692-87214:- | gene-YBL008W_SA1 | rna-NM_001178248.2_SA1 | cds-NP_009545.2_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:218543-221065:+ | gene-YBL008W_ThermosaccDry | rna-NM_001178248.2_ThermosaccDry | cds-NP_009545.2_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:200664-203186:+ | gene-YBL008W_VR1 | rna-NM_001178248.2_VR1 | cds-NP_009545.2_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:194748-197270:+ | gene-YBL008W_ZTW1 | rna-NM_001178248.2_ZTW1 | cds-NP_009545.2_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:230325-232847:+ | gene-YBL008W_Sparadoxus | rna-NM_001178248.2_Sparadoxus | cds-NP_009545.2_Sparadoxus | 89.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |