HIM1 (YDR317W)

Gene profile

Gene name: HIM1
Reference locus (S288C): YDR317W
Gene biotype: protein_coding

Description: Protein him1; Protein of unknown function involved in DNA repair

Top 10 interactors (score): HSM3 (0.81); PMS1 (0.781); HMO1 (0.774); APN1 (0.774); RAD2 (0.755); REV3 (0.611); RAD54 (0.497)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005298.1:1048226-1049470:+ gene-YDR317W_AKU4011 rna-NM_001180625.3_AKU4011 cds-NP_010603.3_AKU4011 99.1 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000080.1:82073-83317:- gene-YDR317W_BG1 rna-NM_001180625.3_BG1 cds-NP_010603.3_BG1 99.6 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005506.1:1075756-1077000:+ gene-YDR317W_Bruggeman rna-NM_001180625.3_Bruggeman cds-NP_010603.3_Bruggeman 99.5 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005522.1:1062514-1063758:+ gene-YDR317W_CAT1 rna-NM_001180625.3_CAT1 cds-NP_010603.3_CAT1 99.5 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005362.1:1042670-1043914:+ gene-YDR317W_CBS1585 rna-NM_001180625.3_CBS1585 cds-NP_010603.3_CBS1585 99.2 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005346.1:1061055-1062299:+ gene-YDR317W_CBS436 rna-NM_001180625.3_CBS436 cds-NP_010603.3_CBS436 99.7 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005330.1:1039357-1040601:+ gene-YDR317W_CBS6412 rna-NM_001180625.3_CBS6412 cds-NP_010603.3_CBS6412 99.2 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005314.1:1060590-1061834:+ gene-YDR317W_CBS6413 rna-NM_001180625.3_CBS6413 cds-NP_010603.3_CBS6413 99.2 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001525.1:1100828-1102072:+ gene-YDR317W_CENPK1137D rna-NM_001180625.3_CENPK1137D cds-NP_010603.3_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005478.1:223767-225011:+ gene-YDR317W_EthanolRed rna-NM_001180625.3_EthanolRed cds-NP_010603.3_EthanolRed 99.2 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005538.1:1054982-1056226:+ gene-YDR317W_FaliES1 rna-NM_001180625.3_FaliES1 cds-NP_010603.3_FaliES1 99.2 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000386.1:7496-8740:+ gene-YDR317W_JAY291 rna-NM_001180625.3_JAY291 cds-NP_010603.3_JAY291 99.5 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005410.1:1061018-1062262:+ gene-YDR317W_MUCL30387 rna-NM_001180625.3_MUCL30387 cds-NP_010603.3_MUCL30387 99.5 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005442.1:1049952-1051196:+ gene-YDR317W_MUCL30388 rna-NM_001180625.3_MUCL30388 cds-NP_010603.3_MUCL30388 99.5 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005282.1:1034477-1035721:+ gene-YDR317W_MUCL39482 rna-NM_001180625.3_MUCL39482 cds-NP_010603.3_MUCL39482 99.2 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005426.1:981567-982811:+ gene-YDR317W_MUCL42920 rna-NM_001180625.3_MUCL42920 cds-NP_010603.3_MUCL42920 99.5 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011813.1:1102107-1103351:+ gene-YDR317W_NCIM3186 rna-NM_001180625.3_NCIM3186 cds-NP_010603.3_NCIM3186 99.2 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005266.1:1047769-1049013:+ gene-YDR317W_NCYC1407 rna-NM_001180625.3_NCYC1407 cds-NP_010603.3_NCYC1407 99.1 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994143.1:1058772-1060016:+ gene-YDR317W_PE2H3 rna-NM_001180625.3_PE2H3 cds-NP_010603.3_PE2H3 99.5 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999875.1:1064357-1065601:+ gene-YDR317W_PE2H4 rna-NM_001180625.3_PE2H4 cds-NP_010603.3_PE2H4 99.5 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001136.10:1102184-1103428:+ gene-YDR317W_S288C rna-NM_001180625.3_S288C cds-NP_010603.3_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000025.1:73003-74247:+ gene-YDR317W_SA1 rna-NM_001180625.3_SA1 cds-NP_010603.3_SA1 99.6 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005490.1:1059255-1060499:+ gene-YDR317W_ThermosaccDry rna-NM_001180625.3_ThermosaccDry cds-NP_010603.3_ThermosaccDry 99.2 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005458.1:1075187-1076431:+ gene-YDR317W_VR1 rna-NM_001180625.3_VR1 cds-NP_010603.3_VR1 99.5 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000008.1:103370-104614:+ gene-YDR317W_ZTW1 rna-NM_001180625.3_ZTW1 cds-NP_010603.3_ZTW1 99.4 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047490.1:1054752-1055996:+ gene-YDR317W_Sparadoxus rna-NM_001180625.3_Sparadoxus cds-NP_010603.3_Sparadoxus 86.5 100.0 Verified 1 1 1 False True False False False

Additional files