Gene name: HHT2
Reference locus (S288C): YNL031C
Gene biotype: protein_coding
Description: Histone H3; core histone protein required for chromatin assembly, part of heterochromatin-mediated telomeric and HM silencing; one of two identical histone H3 proteins (see HHT1); regulated by acetylation, methylation, and phosphorylation; H3K14 acetylation plays an important role in the unfolding of strongly positioned nucleosomes during repair of UV damage
Top 10 interactors (score): HHF1 (0.999); HHF2 (0.999); HTB2 (0.999); HTZ1 (0.999); ASF1 (0.999); RTT109 (0.999); HTA1 (0.999); HAT2 (0.999); HHT1 (0.999); HTB1 (0.999); GCN5 (0.999); HTA2 (0.999); SPT16 (0.999); SIR3 (0.998); RTT106 (0.998); DOT1 (0.997); SET2 (0.997); SET1 (0.997); POB3 (0.997); RPD3 (0.995)
Homologues (species, bitscore): H3F3B (Homo sapiens, 250.8); H3f3b (Mus musculus, 250.8); H3f3c (Danio rerio, 250.8); H3-3a (Xenopus tropicalis, 250.8); His3.3A (Drosophila melanogaster, 250.8); his-71 (Caenorhabditis elegans, 250.0); HTR2 (Arabidopsis thaliana, 245.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:558114-558524:- | gene-YNL031C_AKU4011 | rna-NM_001182870.1_AKU4011 | cds-NP_014367.1_AKU4011 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:481627-482037:+ | gene-YNL031C_BG1 | rna-NM_001182870.1_BG1 | cds-NP_014367.1_BG1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:575515-575925:- | gene-YNL031C_Bruggeman | rna-NM_001182870.1_Bruggeman | cds-NP_014367.1_Bruggeman | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:610970-611380:- | gene-YNL031C_CAT1 | rna-NM_001182870.1_CAT1 | cds-NP_014367.1_CAT1 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:563791-564201:- | gene-YNL031C_CBS1585 | rna-NM_001182870.1_CBS1585 | cds-NP_014367.1_CBS1585 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:626195-626605:- | gene-YNL031C_CBS436 | rna-NM_001182870.1_CBS436 | cds-NP_014367.1_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:553631-554041:- | gene-YNL031C_CBS6412 | rna-NM_001182870.1_CBS6412 | cds-NP_014367.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:554951-555361:- | gene-YNL031C_CBS6413 | rna-NM_001182870.1_CBS6413 | cds-NP_014367.1_CBS6413 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:569247-569657:- | gene-YNL031C_CENPK1137D | rna-NM_001182870.1_CENPK1137D | cds-NP_014367.1_CENPK1137D | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:560194-560604:- | gene-YNL031C_EthanolRed | rna-NM_001182870.1_EthanolRed | cds-NP_014367.1_EthanolRed | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:551224-551634:- | gene-YNL031C_FaliES1 | rna-NM_001182870.1_FaliES1 | cds-NP_014367.1_FaliES1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000387.1:22183-22593:+ | gene-YNL031C_JAY291 | rna-NM_001182870.1_JAY291 | cds-NP_014367.1_JAY291 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:571405-571815:- | gene-YNL031C_MUCL30387 | rna-NM_001182870.1_MUCL30387 | cds-NP_014367.1_MUCL30387 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:614209-614619:- | gene-YNL031C_MUCL30388 | rna-NM_001182870.1_MUCL30388 | cds-NP_014367.1_MUCL30388 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:555393-555803:- | gene-YNL031C_MUCL39482 | rna-NM_001182870.1_MUCL39482 | cds-NP_014367.1_MUCL39482 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:558938-559348:- | gene-YNL031C_MUCL42920 | rna-NM_001182870.1_MUCL42920 | cds-NP_014367.1_MUCL42920 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:575609-576019:- | gene-YNL031C_NCIM3186 | rna-NM_001182870.1_NCIM3186 | cds-NP_014367.1_NCIM3186 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:557598-558008:- | gene-YNL031C_NCYC1407 | rna-NM_001182870.1_NCYC1407 | cds-NP_014367.1_NCYC1407 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:560114-560524:- | gene-YNL031C_PE2H3 | rna-NM_001182870.1_PE2H3 | cds-NP_014367.1_PE2H3 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:561456-561866:- | gene-YNL031C_PE2H4 | rna-NM_001182870.1_PE2H4 | cds-NP_014367.1_PE2H4 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:575640-576050:- | gene-YNL031C_S288C | rna-NM_001182870.1_S288C | cds-NP_014367.1_S288C | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000109.1:1673-2083:- | gene-YNL031C_SA1 | rna-NM_001182870.1_SA1 | cds-NP_014367.1_SA1 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:551811-552221:- | gene-YNL031C_ThermosaccDry | rna-NM_001182870.1_ThermosaccDry | cds-NP_014367.1_ThermosaccDry | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:590540-590950:+ | gene-YNL031C_VR1 | rna-NM_001182870.1_VR1 | cds-NP_014367.1_VR1 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:481220-481630:+ | gene-YNL031C_ZTW1 | rna-NM_001182870.1_ZTW1 | cds-NP_014367.1_ZTW1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:567098-567508:- | gene-YNL031C_Sparadoxus | rna-NM_001182870.1_Sparadoxus | cds-NP_014367.1_Sparadoxus | 96.1 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |