Gene name: HHF2
Reference locus (S288C): YNL030W
Gene biotype: protein_coding
Description: Histone H4; core histone protein required for chromatin assembly and chromosome function; one of two identical histone proteins (see also HHF1); contributes to telomeric silencing; N-terminal domain involved in maintaining genomic integrity
Top 10 interactors (score): HTA2 (0.999); HTA1 (0.999); HHT1 (0.999); HTB1 (0.999); HHT2 (0.999); HTB2 (0.999); HAT2 (0.998); POB3 (0.998); HHF1 (0.997); SIR3 (0.996); SPT16 (0.996); CSE4 (0.994); ASF1 (0.994); HAT1 (0.994); HTZ1 (0.992); GCN5 (0.99); HHO1 (0.976); MCM2 (0.973); ESA1 (0.973); SIR2 (0.968)
Homologues (species, bitscore): HIST1H4F (Homo sapiens, 193.7); Hist1h4j (Mus musculus, 193.7); Si:dkey-261m9.17 (Danio rerio, 193.7); ENSXETP00000001377 (Xenopus tropicalis, 193.7); FBpp0091114 (Drosophila melanogaster, 193.4); his-46 (Caenorhabditis elegans, 192.2); AT1G07660.1 (Arabidopsis thaliana, 192.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:559201-559512:+ | gene-YNL030W_AKU4011 | rna-NM_001182869.1_AKU4011 | cds-NP_014368.1_AKU4011 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:480640-480951:- | gene-YNL030W_BG1 | rna-NM_001182869.1_BG1 | cds-NP_014368.1_BG1 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:576600-576911:+ | gene-YNL030W_Bruggeman | rna-NM_001182869.1_Bruggeman | cds-NP_014368.1_Bruggeman | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:612056-612367:+ | gene-YNL030W_CAT1 | rna-NM_001182869.1_CAT1 | cds-NP_014368.1_CAT1 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:564878-565189:+ | gene-YNL030W_CBS1585 | rna-NM_001182869.1_CBS1585 | cds-NP_014368.1_CBS1585 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:627281-627592:+ | gene-YNL030W_CBS436 | rna-NM_001182869.1_CBS436 | cds-NP_014368.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:554718-555029:+ | gene-YNL030W_CBS6412 | rna-NM_001182869.1_CBS6412 | cds-NP_014368.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:556038-556349:+ | gene-YNL030W_CBS6413 | rna-NM_001182869.1_CBS6413 | cds-NP_014368.1_CBS6413 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:570334-570645:+ | gene-YNL030W_CENPK1137D | rna-NM_001182869.1_CENPK1137D | cds-NP_014368.1_CENPK1137D | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:561281-561592:+ | gene-YNL030W_EthanolRed | rna-NM_001182869.1_EthanolRed | cds-NP_014368.1_EthanolRed | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:552311-552622:+ | gene-YNL030W_FaliES1 | rna-NM_001182869.1_FaliES1 | cds-NP_014368.1_FaliES1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000387.1:21196-21507:- | gene-YNL030W_JAY291 | rna-NM_001182869.1_JAY291 | cds-NP_014368.1_JAY291 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:572490-572801:+ | gene-YNL030W_MUCL30387 | rna-NM_001182869.1_MUCL30387 | cds-NP_014368.1_MUCL30387 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:615294-615605:+ | gene-YNL030W_MUCL30388 | rna-NM_001182869.1_MUCL30388 | cds-NP_014368.1_MUCL30388 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:556480-556791:+ | gene-YNL030W_MUCL39482 | rna-NM_001182869.1_MUCL39482 | cds-NP_014368.1_MUCL39482 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:560023-560334:+ | gene-YNL030W_MUCL42920 | rna-NM_001182869.1_MUCL42920 | cds-NP_014368.1_MUCL42920 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:576696-577007:+ | gene-YNL030W_NCIM3186 | rna-NM_001182869.1_NCIM3186 | cds-NP_014368.1_NCIM3186 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:558685-558996:+ | gene-YNL030W_NCYC1407 | rna-NM_001182869.1_NCYC1407 | cds-NP_014368.1_NCYC1407 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:561200-561511:+ | gene-YNL030W_PE2H3 | rna-NM_001182869.1_PE2H3 | cds-NP_014368.1_PE2H3 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:562542-562853:+ | gene-YNL030W_PE2H4 | rna-NM_001182869.1_PE2H4 | cds-NP_014368.1_PE2H4 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:576727-577038:+ | gene-YNL030W_S288C | rna-NM_001182869.1_S288C | cds-NP_014368.1_S288C | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000109.1:2759-3070:+ | gene-YNL030W_SA1 | rna-NM_001182869.1_SA1 | cds-NP_014368.1_SA1 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:552898-553209:+ | gene-YNL030W_ThermosaccDry | rna-NM_001182869.1_ThermosaccDry | cds-NP_014368.1_ThermosaccDry | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:589553-589864:- | gene-YNL030W_VR1 | rna-NM_001182869.1_VR1 | cds-NP_014368.1_VR1 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:480234-480545:- | gene-YNL030W_ZTW1 | rna-NM_001182869.1_ZTW1 | cds-NP_014368.1_ZTW1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:568187-568498:+ | gene-YNL030W_Sparadoxus | rna-NM_001182869.1_Sparadoxus | cds-NP_014368.1_Sparadoxus | 97.1 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |