HFL1 (YKR051W)


Gene profile

Gene name: HFL1
Reference locus (S288C): YKR051W
Gene biotype: protein_coding

Description: Transmembrane protein 184 homolog YKR051W; Putative protein of unknown function

Top 10 interactors (score): ATG8 (0.988); ATG4 (0.603); GDE1 (0.598); SEC2 (0.562); NPC2 (0.535); ACB1 (0.506); SYG1 (0.478); ERD1 (0.478); MPE1 (0.469); CRN1 (0.467)

Homologues (species, bitscore): TMEM184C (Homo sapiens, 123.2); Tmem184c (Mus musculus, 126.7); tmem184c (Danio rerio, 129.8); tmem184c (Xenopus tropicalis, 125.9); CG12004 (Drosophila melanogaster, 111.3); F40E10.6 (Caenorhabditis elegans, 123.2); AT3G05940 (Arabidopsis thaliana, 126.7)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005305.1:516243-517499:+ gene-YKR051W_AKU4011 rna-NM_001179841.3_AKU4011 cds-NP_012977.3_AKU4011 99.8 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000113.1:126026-127282:- gene-YKR051W_BG1 rna-NM_001179841.3_BG1 cds-NP_012977.3_BG1 99.3 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005513.1:538421-539677:+ gene-YKR051W_Bruggeman rna-NM_001179841.3_Bruggeman cds-NP_012977.3_Bruggeman 99.6 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005529.1:534845-536101:+ gene-YKR051W_CAT1 rna-NM_001179841.3_CAT1 cds-NP_012977.3_CAT1 99.5 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005369.1:528983-530239:+ gene-YKR051W_CBS1585 rna-NM_001179841.3_CBS1585 cds-NP_012977.3_CBS1585 99.8 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005353.1:527816-529072:+ gene-YKR051W_CBS436 rna-NM_001179841.3_CBS436 cds-NP_012977.3_CBS436 99.3 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005337.1:513161-514417:+ gene-YKR051W_CBS6412 rna-NM_001179841.3_CBS6412 cds-NP_012977.3_CBS6412 99.8 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005321.1:528803-530059:+ gene-YKR051W_CBS6413 rna-NM_001179841.3_CBS6413 cds-NP_012977.3_CBS6413 99.8 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001532.1:530602-531858:+ gene-YKR051W_CENPK1137D rna-NM_001179841.3_CENPK1137D cds-NP_012977.3_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005481.1:526564-527820:+ gene-YKR051W_EthanolRed rna-NM_001179841.3_EthanolRed cds-NP_012977.3_EthanolRed 99.9 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005545.1:529701-530957:+ gene-YKR051W_FaliES1 rna-NM_001179841.3_FaliES1 cds-NP_012977.3_FaliES1 99.9 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000077.1:22843-24099:- gene-YKR051W_JAY291 rna-NM_001179841.3_JAY291 cds-NP_012977.3_JAY291 99.3 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005417.1:538819-540075:+ gene-YKR051W_MUCL30387 rna-NM_001179841.3_MUCL30387 cds-NP_012977.3_MUCL30387 99.3 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005449.1:533180-534436:+ gene-YKR051W_MUCL30388 rna-NM_001179841.3_MUCL30388 cds-NP_012977.3_MUCL30388 99.7 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005289.1:528311-529567:+ gene-YKR051W_MUCL39482 rna-NM_001179841.3_MUCL39482 cds-NP_012977.3_MUCL39482 99.7 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005433.1:534335-535591:+ gene-YKR051W_MUCL42920 rna-NM_001179841.3_MUCL42920 cds-NP_012977.3_MUCL42920 99.3 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011820.1:530935-532191:+ gene-YKR051W_NCIM3186 rna-NM_001179841.3_NCIM3186 cds-NP_012977.3_NCIM3186 99.6 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005273.1:528525-529781:+ gene-YKR051W_NCYC1407 rna-NM_001179841.3_NCYC1407 cds-NP_012977.3_NCYC1407 99.8 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994150.1:553892-555148:+ gene-YKR051W_PE2H3 rna-NM_001179841.3_PE2H3 cds-NP_012977.3_PE2H3 99.3 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999882.1:538287-539543:+ gene-YKR051W_PE2H4 rna-NM_001179841.3_PE2H4 cds-NP_012977.3_PE2H4 99.3 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001143.9:530946-532202:+ gene-YKR051W_S288C rna-NM_001179841.3_S288C cds-NP_012977.3_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000093.1:14048-15304:+ gene-YKR051W_SA1 rna-NM_001179841.3_SA1 cds-NP_012977.3_SA1 99.6 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005497.1:528940-530196:+ gene-YKR051W_ThermosaccDry rna-NM_001179841.3_ThermosaccDry cds-NP_012977.3_ThermosaccDry 99.9 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005465.1:528960-530216:+ gene-YKR051W_VR1 rna-NM_001179841.3_VR1 cds-NP_012977.3_VR1 99.3 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000022.1:526929-528185:+ gene-YKR051W_ZTW1 rna-NM_001179841.3_ZTW1 cds-NP_012977.3_ZTW1 99.9 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047497.1:552392-553651:+ gene-YKR051W_Sparadoxus rna-NM_001179841.3_Sparadoxus cds-NP_012977.3_Sparadoxus 90.0 100.0 Verified 1 1 1 False True False False False

Additional files