Gene name: HER1
Reference locus (S288C): YOR227W
Gene biotype: protein_coding
Description: HMG2-induced ER-remodeling protein 1; Protein of unknown function; required for proliferation or remodeling of the ER that is caused by overexpression of Hmg2p; may interact with ribosomes, based on co-purification experiments; HER1 has a paralog, GIP3, that arose from the whole genome duplication
Top 10 interactors (score): HER2 (0.815); GLC7 (0.758); ALY1 (0.745); YDL176W (0.715); CMR2 (0.712); TRI1 (0.696); NOP2 (0.603); MPP6 (0.574); SEA4 (0.489); NKP1 (0.487); CWC23 (0.485); NKP2 (0.485); LIN1 (0.481); BNI4 (0.461); RTK1 (0.454); PRP4 (0.45)
Homologues (species, bitscore): MUC5AC (Homo sapiens, 62.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:753607-757347:+ | gene-YOR227W_AKU4011 | rna-NM_001183646.1_AKU4011 | cds-NP_014870.1_AKU4011 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000123.1:155640-159380:+ | gene-YOR227W_BG1 | rna-NM_001183646.1_BG1 | cds-NP_014870.1_BG1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:739070-742810:+ | gene-YOR227W_Bruggeman | rna-NM_001183646.1_Bruggeman | cds-NP_014870.1_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:739717-743457:+ | gene-YOR227W_CAT1 | rna-NM_001183646.1_CAT1 | cds-NP_014870.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:736593-740333:+ | gene-YOR227W_CBS1585 | rna-NM_001183646.1_CBS1585 | cds-NP_014870.1_CBS1585 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:735282-739022:+ | gene-YOR227W_CBS436 | rna-NM_001183646.1_CBS436 | cds-NP_014870.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:733713-737453:+ | gene-YOR227W_CBS6412 | rna-NM_001183646.1_CBS6412 | cds-NP_014870.1_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:742352-746092:+ | gene-YOR227W_CBS6413 | rna-NM_001183646.1_CBS6413 | cds-NP_014870.1_CBS6413 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:762592-766332:+ | gene-YOR227W_CENPK1137D | rna-NM_001183646.1_CENPK1137D | cds-NP_014870.1_CENPK1137D | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:729744-733484:+ | gene-YOR227W_EthanolRed | rna-NM_001183646.1_EthanolRed | cds-NP_014870.1_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:735141-738881:+ | gene-YOR227W_FaliES1 | rna-NM_001183646.1_FaliES1 | cds-NP_014870.1_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000381.1:87881-91621:- | gene-YOR227W_JAY291 | rna-NM_001183646.1_JAY291 | cds-NP_014870.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:742407-746147:+ | gene-YOR227W_MUCL30387 | rna-NM_001183646.1_MUCL30387 | cds-NP_014870.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:749826-754195:+ | gene-YOR227W_MUCL30388 | rna-NM_001183646.1_MUCL30388 | cds-NP_014870.1_MUCL30388 | 85.4 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:743923-747663:+ | gene-YOR227W_MUCL39482 | rna-NM_001183646.1_MUCL39482 | cds-NP_014870.1_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:753504-757244:+ | gene-YOR227W_MUCL42920 | rna-NM_001183646.1_MUCL42920 | cds-NP_014870.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:762714-766454:+ | gene-YOR227W_NCIM3186 | rna-NM_001183646.1_NCIM3186 | cds-NP_014870.1_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:744025-747765:+ | gene-YOR227W_NCYC1407 | rna-NM_001183646.1_NCYC1407 | cds-NP_014870.1_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:743415-747155:+ | gene-YOR227W_PE2H3 | rna-NM_001183646.1_PE2H3 | cds-NP_014870.1_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:753792-757532:+ | gene-YOR227W_PE2H4 | rna-NM_001183646.1_PE2H4 | cds-NP_014870.1_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:762825-766565:+ | gene-YOR227W_S288C | rna-NM_001183646.1_S288C | cds-NP_014870.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000006.1:172822-176562:+ | gene-YOR227W_SA1 | rna-NM_001183646.1_SA1 | cds-NP_014870.1_SA1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:734326-738066:+ | gene-YOR227W_ThermosaccDry | rna-NM_001183646.1_ThermosaccDry | cds-NP_014870.1_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:797856-801596:+ | gene-YOR227W_VR1 | rna-NM_001183646.1_VR1 | cds-NP_014870.1_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:467225-470965:+ | gene-YOR227W_ZTW1 | rna-NM_001183646.1_ZTW1 | cds-NP_014870.1_ZTW1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:740188-743925:+ | gene-YOR227W_Sparadoxus | rna-NM_001183646.1_Sparadoxus | cds-NP_014870.1_Sparadoxus | 89.2 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |