HEM14 (YER014W)


Gene profile

Gene name: HEM14
Reference locus (S288C): YER014W
Gene biotype: protein_coding

Description: Protoporphyrinogen oxidase; a mitochondrial enzyme that catalyzes the seventh step in the heme biosynthetic pathway, converting protoporphyrinogen IX to protoporphyrin IX; inhibited by diphenyl ether-type herbicides

Top 10 interactors (score): HEM13 (0.999); HEM15 (0.998); HEM12 (0.998); HEM3 (0.986); HEM4 (0.979); HEM2 (0.976); HEM1 (0.972); HEM25 (0.941); ATM1 (0.791); COX15 (0.781); YJR085C (0.774); HMX1 (0.76); FLX1 (0.717); LSC2 (0.686); COX10 (0.68); MDL1 (0.654); MDL2 (0.654); COQ3 (0.646); RAD14 (0.615); ERG9 (0.611)

Homologues (species, bitscore): PPOX (Homo sapiens, 122.5); Ppox (Mus musculus, 127.1); ppox (Danio rerio, 124.8); ppox (Xenopus tropicalis, 94.0); Ppox (Drosophila melanogaster, 144.1); PPOP1 (Arabidopsis thaliana, 68.9)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005299.1:176645-178264:+ gene-YER014W_AKU4011 rna-NM_001178905.1_AKU4011 cds-NP_010930.1_AKU4011 99.2 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000011.1:247835-249454:- gene-YER014W_BG1 rna-NM_001178905.1_BG1 cds-NP_010930.1_BG1 99.7 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005507.1:184504-186123:+ gene-YER014W_Bruggeman rna-NM_001178905.1_Bruggeman cds-NP_010930.1_Bruggeman 99.2 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005523.1:179146-180765:+ gene-YER014W_CAT1 rna-NM_001178905.1_CAT1 cds-NP_010930.1_CAT1 99.7 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005363.1:176568-178187:+ gene-YER014W_CBS1585 rna-NM_001178905.1_CBS1585 cds-NP_010930.1_CBS1585 99.3 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005347.1:178142-179761:+ gene-YER014W_CBS436 rna-NM_001178905.1_CBS436 cds-NP_010930.1_CBS436 99.8 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005331.1:176812-178431:+ gene-YER014W_CBS6412 rna-NM_001178905.1_CBS6412 cds-NP_010930.1_CBS6412 99.3 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005315.1:181598-183217:+ gene-YER014W_CBS6413 rna-NM_001178905.1_CBS6413 cds-NP_010930.1_CBS6413 99.3 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001526.1:180462-182081:+ gene-YER014W_CENPK1137D rna-NM_001178905.1_CENPK1137D cds-NP_010930.1_CENPK1137D 99.6 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005475.1:177271-178890:+ gene-YER014W_EthanolRed rna-NM_001178905.1_EthanolRed cds-NP_010930.1_EthanolRed 99.2 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005539.1:177531-179150:+ gene-YER014W_FaliES1 rna-NM_001178905.1_FaliES1 cds-NP_010930.1_FaliES1 99.1 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000024.1:44157-45776:+ gene-YER014W_JAY291 rna-NM_001178905.1_JAY291 cds-NP_010930.1_JAY291 99.7 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005411.1:180697-182316:+ gene-YER014W_MUCL30387 rna-NM_001178905.1_MUCL30387 cds-NP_010930.1_MUCL30387 99.2 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005443.1:176972-178591:+ gene-YER014W_MUCL30388 rna-NM_001178905.1_MUCL30388 cds-NP_010930.1_MUCL30388 99.2 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005283.1:175611-177230:+ gene-YER014W_MUCL39482 rna-NM_001178905.1_MUCL39482 cds-NP_010930.1_MUCL39482 99.3 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005427.1:181728-183347:+ gene-YER014W_MUCL42920 rna-NM_001178905.1_MUCL42920 cds-NP_010930.1_MUCL42920 99.1 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011814.1:182599-184218:+ gene-YER014W_NCIM3186 rna-NM_001178905.1_NCIM3186 cds-NP_010930.1_NCIM3186 98.9 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005267.1:180683-182302:+ gene-YER014W_NCYC1407 rna-NM_001178905.1_NCYC1407 cds-NP_010930.1_NCYC1407 99.3 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994144.1:184984-186603:+ gene-YER014W_PE2H3 rna-NM_001178905.1_PE2H3 cds-NP_010930.1_PE2H3 99.9 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999876.1:180899-182518:+ gene-YER014W_PE2H4 rna-NM_001178905.1_PE2H4 cds-NP_010930.1_PE2H4 99.7 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001137.3:182600-184219:+ gene-YER014W_S288C rna-NM_001178905.1_S288C cds-NP_010930.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000020.1:59451-61070:- gene-YER014W_SA1 rna-NM_001178905.1_SA1 cds-NP_010930.1_SA1 99.0 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005491.1:178302-179921:+ gene-YER014W_ThermosaccDry rna-NM_001178905.1_ThermosaccDry cds-NP_010930.1_ThermosaccDry 99.2 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005459.1:177043-178662:+ gene-YER014W_VR1 rna-NM_001178905.1_VR1 cds-NP_010930.1_VR1 99.9 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000009.1:175514-177133:+ gene-YER014W_ZTW1 rna-NM_001178905.1_ZTW1 cds-NP_010930.1_ZTW1 99.3 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047491.1:180122-181741:+ gene-YER014W_Sparadoxus rna-NM_001178905.1_Sparadoxus cds-NP_010930.1_Sparadoxus 88.4 99.9 Verified 1 1 1 False True False False False

Additional files